[Note] Representative Genome of Lactobacillus rapi

Genome Statistics

Total Length (bp)2,848,015
No. of Sequences88
GC Content(%)42.9%
N5075,163
Gap Ratio(%)0.0%
No. of Proteins2,645
No. of rRNA0
No. of tRNA57
No. of CRISPRS3
Coding Ratio(%)84.9%
Genome Coverage171.5X
Completeness99.03%
Contamination0.16%

Other Info.

Type StatusType Strain
Isolation Sourcenon-salted pickle solution used in production of sunki (Japanese traditional fermented leaves and stems of red turnips)
Instrument ModelIllumina HiSeq 2000
Release Date2014/03/02

Download Files

Genbank Flat File :
SRR1151230.gbk
GFF3-formatted File :
SRR1151230.gff
Genome Fasta File :
SRR1151230.genome.fna
Protein Fasta File :
SRR1151230.protein.faa
CDS Fasta File :
SRR1151230.cds.fna
RNA Fasta File :
SRR1151230.rna.fna
Feature Table :
SRR1151230.features.tsv
Genome Statistics :
SRR1151230.statistics.tsv

External Link

BioProject :
PRJNA222257
NCBI / EBI
BioSample :
SAMN02369472
NCBI / EBI
SRA :
SRR1151230
DDBJ / NCBI / EBI
Taxonomy ID :
1423795
NCBI / EBI
bacterio.net :
Lactobacillus rapi
Search at StrainInfo :
DSM 19907