Show Optional Columns: Original Name BioProject BioSample Assembly Level Completeness Contamination

ID
(click for detail)
Organism Name (curated) Original Name BioProject BioSample Type Status GC% Total
length (bp)
No. of Seqs. CDSs Rating Status Completeness Contamination Note
ERR1045776 Lactobacillus jensenii UMB0077 Lactobacillus jensenii PRJEB8104 SAMEA3319241 34.2% 1,735,470 85 1,739 ☆☆☆☆ Scaffold 98.71% 0.24%
ERR1045819 Lactobacillus gasseri UMB0099 Lactobacillus gasseri PRJEB8104 SAMEA3319281 34.9% 1,938,281 19 1,850 ☆☆☆☆ Contig 99.35% 0.16%
ERR1045824 Lactobacillus gasseri UMB0045 Lactobacillus gasseri PRJEB8104 SAMEA3319297 34.8% 1,896,444 66 1,860 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR203963 Lactobacillus rhamnosus B080_A Lactobacillus rhamnosus PRJEB3060 SAMEA1571064 46.5% 2,957,642 168 2,836 ☆☆☆☆ Scaffold 100.0% 0.16%
ERR203969 Lactobacillus rhamnosus B081_B Lactobacillus rhamnosus PRJEB3060 SAMEA1571052 46.6% 3,035,734 63 2,862 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR203973 Lactobacillus vaginalis B084_A Lactobacillus vaginalis PRJEB3060 SAMEA1571051 40.5% 1,803,415 43 1,770 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR203980 Lactobacillus fermentum B085_C Lactobacillus fermentum PRJEB3060 SAMEA1571114 52.1% 1,963,451 140 1,904 ☆☆☆☆ Scaffold 98.79% 0.37%
ERR203984 Lactobacillus paracasei B086_C Lactobacillus casei PRJEB3060 SAMEA1571070 46.2% 3,077,004 106 2,943 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR203982 Lactobacillus fermentum B086_A Lactobacillus fermentum PRJEB3060 SAMEA1571062 51.7% 2,084,814 157 2,060 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR203990 Lactobacillus gasseri B088_C Lactobacillus gasseri PRJEB3060 SAMEA1571105 35.1% 1,869,435 15 1,805 ☆☆☆☆ Contig 99.35% 0.16%
ERR203992 Lactobacillus vaginalis ATCC 49540 Lactobacillus vaginalis PRJEB3060 SAMEA1571072 type strain 40.5% 1,787,822 86 1,741 ☆☆☆☆ Contig 99.35% 1.13%
ERR203988 Lactobacillus rhamnosus B087_A Lactobacillus rhamnosus PRJEB3060 SAMEA1571043 46.6% 2,925,161 80 2,743 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR203991 Lactobacillus oris ATCC 49062 Lactobacillus oris PRJEB3060 SAMEA1571108 type strain 50.0% 2,034,631 77 1,923 ☆☆☆☆ Scaffold 99.35% 0.24%
ERR203996 Lactobacillus fermentum ATCC 14931 Lactobacillus fermentum PRJEB3060 SAMEA1571124 type strain 52.8% 1,782,450 106 1,742 ☆☆☆☆ Scaffold 98.79% 0.48%
ERR204029 Lactobacillus oris M148_19 Lactobacillus oris PRJEB3060 SAMEA1571082 50.0% 2,120,236 63 2,037 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR203999 Lactobacillus rhamnosus ATCC 7469 Lactobacillus rhamnosus PRJEB3060 SAMEA1571069 type strain 46.7% 2,961,154 61 2,734 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR204032 Lactobacillus gasseri M191_18 Lactobacillus gasseri PRJEB3060 SAMEA1571057 34.7% 1,933,846 40 1,880 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR204036 Lactobacillus gasseri M252_22 Lactobacillus gasseri PRJEB3060 SAMEA1571096 34.8% 1,985,180 52 1,947 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR204041 Lactobacillus fermentum M252_16 Lactobacillus fermentum PRJEB3060 SAMEA1571118 52.1% 1,967,899 115 1,925 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR204045 Lactobacillus oris G205_BL_37_1_27 Lactobacillus oris PRJEB3060 SAMEA1571119 49.8% 2,150,098 130 2,073 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR204047 Lactobacillus gasseri M57_23 Lactobacillus gasseri PRJEB3060 SAMEA1571087 34.8% 1,988,842 20 1,962 ☆☆☆☆ Contig 99.35% 0.16%
ERR204048 Lactobacillus salivarius M87_8 Lactobacillus salivarius PRJEB3060 SAMEA1571063 32.8% 1,975,031 94 1,960 ☆☆☆☆ Scaffold 97.1% 0.48%
ERR204049 Lactobacillus gasseri M80_8 Lactobacillus gasseri PRJEB3060 SAMEA1571039 34.8% 2,032,648 42 1,950 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR204053 Lactobacillus gasseri M72_18 Lactobacillus gasseri PRJEB3060 SAMEA1571045 35.0% 1,825,666 10 1,733 ☆☆☆☆ Contig 99.35% 0.16%
ERR204058 Lactobacillus vaginalis M35_11 Lactobacillus vaginalis PRJEB3060 SAMEA1571046 40.6% 1,842,053 76 1,839 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR256994 Lactobacillus delbrueckii subsp. bulgaricus FLI003 Lactobacillus delbrueckii subsp. bulgaricus PRJEB3012 SAMEA1710530 50.0% 1,745,178 46 1,797 ☆☆☆☆ Scaffold 95.81% 0.16%
ERR298641 Lactobacillus vaginalis G216_2_2 Lactobacillus vaginalis PRJEB3060 SAMEA1920335 40.1% 2,050,118 77 2,004 ☆☆☆☆ Scaffold 99.14% 0.81%
ERR298642 Lactobacillus gastricus G218_2_1 Lactobacillus gastricus PRJEB3060 SAMEA1920334 41.6% 1,946,971 39 1,963 ☆☆☆☆ Contig 97.5% 0.46%
ERR298650 Lactobacillus paracasei G218_2_25 Lactobacillus casei PRJEB3060 SAMEA1920342 46.3% 3,077,684 100 2,906 ☆☆☆☆ Scaffold 99.03% 0.48% The organism name was amended based on the ANI result.
ERR298671 Lactobacillus gasseri G208_2_34 Lactobacillus gasseri PRJEB3060 SAMEA1920364 34.6% 2,051,898 49 2,036 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR298672 Lactobacillus gasseri G215_2_26 Lactobacillus gasseri PRJEB3060 SAMEA1920366 34.7% 1,955,552 42 1,931 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR298697 Lactobacillus rhamnosus G216_5_16 Lactobacillus rhamnosus PRJEB3060 SAMEA1920388 46.7% 3,055,362 55 2,879 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR298711 Lactobacillus helveticus G211_1_20_2 Lactobacillus helveticus PRJEB3060 SAMEA1920403 36.5% 1,960,255 166 2,009 ☆☆☆☆ Scaffold 98.87% 0.16%
ERR298712 Lactobacillus gasseri G216_1_12 Lactobacillus gasseri PRJEB3060 SAMEA1920404 35.1% 1,858,761 27 1,772 ☆☆☆☆ Contig 99.35% 0.16%
ERR386025 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276785 34.6% 1,970,209 38 1,854 ☆☆☆☆ Contig 99.03% 0.16%
ERR386031 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276791 34.6% 1,971,282 33 1,855 ☆☆☆☆ Contig 99.03% 0.16%
ERR386032 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276792 34.6% 2,006,476 40 1,893 ☆☆☆☆ Contig 99.03% 0.16%
ERR386034 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276794 34.6% 1,996,262 32 1,896 ☆☆☆☆ Contig 99.03% 0.16%
ERR386039 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276799 34.6% 1,987,666 25 1,869 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR386046 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276806 34.6% 1,971,188 29 1,856 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387460 Lactobacillus manihotivorans DSM 13343 Lactobacillus manihotivorans PRJEB3060 SAMEA2173666 type strain 47.7% 3,081,436 303 3,012 ☆☆☆☆ Scaffold 99.19% 1.56%
ERR387487 Lactobacillus amylophilus DSM 20533 Lactobacillus amylophilus PRJEB3060 SAMEA2173693 type strain 43.6% 1,553,124 22 1,561 ☆☆☆☆ Scaffold 98.06% 2.18%
ERR387493 Lactobacillus aquaticus DSM 21051 Lactobacillus aquaticus PRJEB3060 SAMEA2173699 type strain 37.4% 2,399,635 32 2,210 ☆☆☆☆ Scaffold 98.87% 0.48%
ERR387496 Lactobacillus paralimentarius DSM 19674 Lactobacillus paralimentarius PRJEB3060 SAMEA2173702 35.3% 2,879,605 33 2,796 ☆☆☆☆ Contig 98.82% 2.77%
ERR387505 Lactobacillus nagelii DSM 13675 Lactobacillus nagelii PRJEB3060 SAMEA2173711 type strain 36.7% 2,493,596 37 2,409 ☆☆☆☆ Scaffold 99.35% 2.16%
ERR387512 Lactobacillus kitasatonis DSM 16761 Lactobacillus kitasatonis PRJEB3060 SAMEA2173718 type strain 37.5% 1,906,076 33 1,917 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387513 Lactobacillus otakiensis DSM 19908 Lactobacillus otakiensis PRJEB3060 SAMEA2173719 type strain 42.4% 2,341,243 22 2,250 ☆☆☆☆ Contig 99.03% 0.81%
ERR387516 Lactobacillus rapi DSM 19907 Lactobacillus rapi PRJEB3060 SAMEA2173722 type strain 42.9% 2,845,033 91 2,643 ☆☆☆☆ Scaffold 98.71% 0.16%
ERR387517 Lactobacillus nasuensis JCM 17158 Lactobacillus nasuensis PRJEB3060 SAMEA2173723 type strain 57.0% 2,272,312 25 2,137 ☆☆☆☆ Contig 99.03% 0.46%
ERR387526 Lactobacillus delbrueckii subsp. bulgaricus DSM 20081 Lactobacillus delbrueckii subsp. bulgaricus PRJEB3060 SAMEA2173732 type strain 49.9% 1,702,224 55 1,761 ☆☆☆☆ Contig 97.74% 0.81%
ERR387529 Lactobacillus frumenti DSM 13145 Lactobacillus frumenti PRJEB3060 SAMEA2173735 type strain 42.6% 1,730,467 22 1,676 ☆☆☆☆ Contig 99.35% 0.16%
ERR387533 Lactobacillus mali ATCC 27304 Lactobacillus mali PRJEB3060 SAMEA2173739 36.4% 2,420,830 83 2,320 ☆☆☆☆ Contig 98.71% 1.02%
ERR387543 Lactobacillus spicheri DSM 15429 Lactobacillus spicheri PRJEB3060 SAMEA2173749 type strain 55.9% 2,742,678 34 2,451 ☆☆☆☆ Contig 98.99% 0.16%
ERR387546 Lactobacillus taiwanensis DSM 21401 Lactobacillus taiwanensis PRJEB3060 SAMEA2173752 type strain 33.9% 1,865,395 39 1,816 ☆☆☆☆ Scaffold 99.25% 0.16%
ERR387550 Lactobacillus uvarum DSM 19971 Lactobacillus uvarum PRJEB3060 SAMEA2173756 type strain 36.9% 2,671,380 115 2,525 ☆☆☆☆ Scaffold 99.35% 1.45%
ERR433465 Lactobacillus ceti DSM 22408 Lactobacillus ceti PRJEB3060 SAMEA2203398 type strain 33.7% 1,388,140 24 1,267 ☆☆☆☆ Scaffold 97.74% 1.24%
ERR433466 Lactobacillus collinoides DSM 20515 Lactobacillus collinoides PRJEB3060 SAMEA2203399 type strain 46.1% 3,593,571 147 3,218 ☆☆☆☆ Scaffold 99.03% 1.34%
ERR433469 Lactobacillus delbrueckii subsp. lactis LMG 7942 Lactobacillus delbrueckii subsp. lactis PRJEB3060 SAMEA2203402 type strain 49.7% 1,862,932 177 1,802 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR433476 Lactobacillus namurensis DSM 19117 Lactobacillus namurensis PRJEB3060 SAMEA2203410 type strain 52.0% 2,470,988 65 2,227 ☆☆☆☆ Contig 100.0% 0.16%
ERR433492 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae PRJEB3060 SAMEA2203426 type strain 43.3% 2,862,392 51 2,703 ☆☆☆☆ Scaffold 99.35% 2.1%
ERR433493 Lactobacillus sakei subsp. carnosus DSM 15831 Lactobacillus sakei subsp. carnosus PRJEB3060 SAMEA2203427 type strain 41.0% 1,975,630 58 1,984 ☆☆☆☆ Scaffold 98.71% 0.16%
ERR433499 Lactobacillus ruminis ATCC 27780 Lactobacillus ruminis PRJEB3060 SAMEA2203433 type strain 43.4% 2,025,861 79 1,903 ☆☆☆☆ Scaffold 98.71% 0.48%
ERR485074 Lactobacillus rhamnosus G210_1_3 Lactobacillus rhamnosus PRJEB3060 SAMEA1920372 46.6% 2,959,953 109 2,820 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR485101 Lactobacillus salivarius G225_2_1 Lactobacillus salivarius PRJEB3060 SAMEA1920397 32.7% 1,905,609 46 1,854 ☆☆☆☆ Contig 99.03% 0.16%
ERR570111 Lactobacillus salivarius G210_1_1 Lactobacillus salivarius PRJEB3060 SAMEA2437603 32.8% 1,865,437 45 1,802 ☆☆☆☆ Scaffold 97.1% 0.16%
ERR570114 Lactobacillus gasseri G210_3_6 Lactobacillus gasseri PRJEB3060 SAMEA2437606 34.7% 1,899,920 37 1,851 ☆☆☆☆ Contig 99.35% 0.16%
ERR570120 Lactobacillus gasseri G210_5_20 Lactobacillus gasseri PRJEB3060 SAMEA2437612 34.7% 1,899,954 37 1,855 ☆☆☆☆ Contig 99.35% 0.16%
ERR570121 Lactobacillus rhamnosus G210_5_30 Lactobacillus rhamnosus PRJEB3060 SAMEA2437613 46.6% 2,960,050 110 2,816 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570125 Lactobacillus rhamnosus G220_2_8 Lactobacillus rhamnosus PRJEB3060 SAMEA2437617 46.8% 2,831,249 65 2,648 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570132 Lactobacillus paracasei G229_5_15 Lactobacillus sp. PRJEB3060 SAMEA2437624 46.2% 3,023,784 132 2,908 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570137 Lactobacillus gasseri G231_2_23 Lactobacillus gasseri PRJEB3060 SAMEA2437629 34.7% 1,866,730 16 1,825 ☆☆☆☆ Contig 99.35% 0.16%
ERR570144 Lactobacillus gasseri G235_3_9 Lactobacillus gasseri PRJEB3060 SAMEA2437636 34.6% 2,097,867 24 2,020 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570152 Lactobacillus paracasei G238_4_14 Lactobacillus sp. PRJEB3060 SAMEA2437644 46.2% 3,110,439 96 3,016 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570153 Lactobacillus fermentum G238_5_26 Lactobacillus fermentum PRJEB3060 SAMEA2437645 51.8% 1,995,426 160 1,944 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570155 Lactobacillus rhamnosus G238_5_9 Lactobacillus rhamnosus PRJEB3060 SAMEA2437647 46.7% 2,900,170 73 2,691 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570156 Lactobacillus fermentum G241_2_20 Lactobacillus fermentum PRJEB3060 SAMEA2437648 51.9% 2,000,255 103 1,986 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR570162 Lactobacillus paracasei G242_1_9 Lactobacillus sp. PRJEB3060 SAMEA2437654 46.2% 2,988,834 89 2,904 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570166 Lactobacillus plantarum G242_4_1 Lactobacillus sp. PRJEB3060 SAMEA2437658 44.5% 3,205,847 143 3,060 ☆☆☆☆ Scaffold 99.35% 2.18% The organism name was inferred from ANI result. (99.0% against L. plantarum subsp. plantarum)
ERR570168 Lactobacillus fermentum G242_5_1 Lactobacillus fermentum PRJEB3060 SAMEA2437660 51.5% 2,037,990 156 2,053 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570173 Lactobacillus rhamnosus G244_4_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437665 46.6% 2,927,816 82 2,748 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570180 Lactobacillus rhamnosus G254_4_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437672 46.6% 2,963,124 20 2,763 ☆☆☆☆ Contig 99.35% 0.16%
ERR570181 Lactobacillus plantarum G254_4_9 Lactobacillus plantarum PRJEB3060 SAMEA2437673 44.4% 3,280,928 48 3,074 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570194 Lactobacillus fermentum G257_1_2 Lactobacillus fermentum PRJEB3060 SAMEA2437686 52.3% 1,895,143 94 1,873 ☆☆☆☆ Scaffold 98.79% 0.56%
ERR570197 Lactobacillus oris G257_2_1 Lactobacillus oris PRJEB3060 SAMEA2437689 49.3% 2,261,668 103 2,234 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR570202 Lactobacillus fermentum G257_4_1 Lactobacillus fermentum PRJEB3060 SAMEA2437694 52.3% 1,894,466 95 1,869 ☆☆☆☆ Scaffold 98.79% 0.56%
ERR570209 Lactobacillus mucosae G260_2_4 Lactobacillus sp. PRJEB3060 SAMEA2437701 46.6% 2,111,415 59 1,952 ☆☆☆☆ Scaffold 99.03% 0.16% The organism name was inferred from ANI result. (97.0% against L. mucosae)
ERR570210 Lactobacillus buchneri G260_4_10 Lactobacillus buchneri PRJEB3060 SAMEA2437702 44.3% 2,476,800 71 2,346 ☆☆☆☆ Contig 99.03% 0.16%
ERR570215 Lactobacillus gasseri G260_5_19 Lactobacillus gasseri PRJEB3060 SAMEA2437707 34.7% 2,028,277 47 1,923 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570221 Lactobacillus rhamnosus G266_2_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437713 46.7% 2,874,678 70 2,660 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570223 Lactobacillus paracasei G266_4_15 Lactobacillus sp. PRJEB3060 SAMEA2437715 46.3% 2,962,079 109 2,786 ☆☆☆☆ Contig 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570228 Lactobacillus paracasei G270_3_2 Lactobacillus sp. PRJEB3060 SAMEA2437720 46.2% 3,084,852 101 2,916 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570232 Lactobacillus paracasei G272_2_4 Lactobacillus sp. PRJEB3060 SAMEA2437724 46.3% 3,052,560 72 2,879 ☆☆☆☆ Contig 99.35% 0.81% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570241 Lactobacillus fermentum G273_4_19 Lactobacillus fermentum PRJEB3060 SAMEA2437733 51.9% 1,978,207 145 1,940 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570258 Lactobacillus paracasei G277_5_21 Lactobacillus sp. PRJEB3060 SAMEA2437750 46.2% 3,021,336 95 2,921 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570259 Lactobacillus rhamnosus G277_5_22 Lactobacillus rhamnosus PRJEB3060 SAMEA2437751 46.5% 3,033,537 61 2,905 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570266 Lactobacillus oris G278_2_27 Lactobacillus oris PRJEB3060 SAMEA2437758 49.9% 2,114,608 93 2,014 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR570270 Lactobacillus gasseri G278_5_18 Lactobacillus gasseri PRJEB3060 SAMEA2437762 35.1% 1,896,554 29 1,828 ☆☆☆☆ Contig 99.35% 0.16%
ERR570272 Lactobacillus gasseri G279_1_4 Lactobacillus gasseri PRJEB3060 SAMEA2437764 34.7% 1,859,713 19 1,833 ☆☆☆☆ Contig 99.35% 0.16%
ERR570276 Lactobacillus vaginalis G279_3_1 Lactobacillus vaginalis PRJEB3060 SAMEA2437768 40.1% 1,944,313 61 1,909 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR570278 Lactobacillus salivarius G279_4_7 Lactobacillus salivarius PRJEB3060 SAMEA2437770 32.8% 1,993,759 35 1,978 ☆☆☆☆ Contig 99.03% 0.38%
ERR570283 Lactobacillus paracasei G283_2_19 Lactobacillus sp. PRJEB3060 SAMEA2437775 46.2% 3,011,103 146 2,855 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570286 Lactobacillus paracasei G283_4_10 Lactobacillus sp. PRJEB3060 SAMEA2437778 46.2% 3,001,312 113 2,852 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR900640 Lactobacillus gasseri G287_5_2 Lactobacillus gasseri PRJEB3060 SAMEA3206620 35.1% 1,921,618 19 1,863 ☆☆☆☆ Contig 99.35% 0.16%
ERR900641 Lactobacillus gasseri G287_3_7 Lactobacillus gasseri PRJEB3060 SAMEA3206621 34.6% 2,044,868 73 2,000 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR900643 Lactobacillus gasseri G220_2_4 Lactobacillus gasseri PRJEB3060 SAMEA3206623 34.8% 1,987,899 44 1,933 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1151128 Lactobacillus helveticus CGMCC 1.1877 Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 PRJNA222257 SAMN02369370 type strain 36.8% 1,868,392 247 1,995 ☆☆☆☆ Scaffold 98.23% 0.16%
SRR1151133 Lactobacillus coryniformis subsp. torquens DSM 20004 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 PRJNA222257 SAMN02369375 type strain 43.0% 2,657,964 317 2,541 ☆☆☆☆ Scaffold 95.81% 4.63%
SRR1151138 Lactobacillus equigenerosi DSM 18793 Lactobacillus equigenerosi DSM 18793 = JCM 14505 PRJNA222257 SAMN02369380 type strain 42.7% 1,599,169 46 1,545 ☆☆☆☆ Scaffold 97.18% 0.4%
SRR1151159 Lactobacillus iners DSM 13335 Lactobacillus iners DSM 13335 PRJNA222257 SAMN02369401 type strain 32.5% 1,274,183 25 1,196 ☆☆☆☆ Scaffold 99.03% 0.0%
SRR1151162 Lactobacillus jensenii DSM 20557 Lactobacillus jensenii DSM 20557 PRJNA222257 SAMN02369404 type strain 34.3% 1,615,929 46 1,478 ☆☆☆☆ Scaffold 98.71% 0.24%
SRR1151164 Lactobacillus mucosae DSM 13345 Lactobacillus mucosae DSM 13345 PRJNA222257 SAMN02369406 type strain 46.4% 2,280,266 48 2,044 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151167 Lactobacillus pantheris DSM 15945 Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 PRJNA222257 SAMN02369409 type strain 52.9% 2,534,117 50 2,287 ☆☆☆☆ Scaffold 98.39% 1.77%
SRR1151204 Lactobacillus floricola DSM 23037 Lactobacillus floricola DSM 23037 = JCM 16512 PRJNA222257 SAMN02369446 type strain 34.5% 1,364,649 20 1,314 ☆☆☆☆ Scaffold 95.35% 1.45%
SRR1151205 Lactobacillus florum DSM 22689 Lactobacillus florum DSM 22689 = JCM 16035 PRJNA222257 SAMN02369447 type strain 41.1% 1,354,760 27 1,313 ☆☆☆☆ Contig 97.77% 0.06%
SRR1151208 Lactobacillus graminis DSM 20719 Lactobacillus graminis DSM 20719 PRJNA222257 SAMN02369450 type strain 40.3% 1,832,125 54 1,738 ☆☆☆☆ Contig 98.39% 0.24%
SRR1151209 Lactobacillus harbinensis DSM 16991 Lactobacillus harbinensis DSM 16991 PRJNA222257 SAMN02369451 type strain 53.1% 3,132,058 157 3,041 ☆☆☆☆ Scaffold 98.39% 2.39%
SRR1151232 Lactobacillus similis DSM 23365 Lactobacillus similis DSM 23365 = JCM 2765 PRJNA222257 SAMN02369474 type strain 47.0% 3,454,844 157 3,089 ☆☆☆☆ Scaffold 99.35% 1.1%
SRR1151235 Lactobacillus sunkii DSM 19904 Lactobacillus sunkii DSM 19904 PRJNA222257 SAMN02369477 type strain 42.1% 2,693,190 71 2,545 ☆☆☆☆ Contig 99.03% 0.81%
SRR1151252 Lactobacillus pontis DSM 8475 Lactobacillus pontis DSM 8475 PRJNA222257 SAMN02369494 type strain 53.5% 1,656,883 58 1,614 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1151256 Lactobacillus zymae DSM 19395 Lactobacillus zymae DSM 19395 PRJNA222257 SAMN02369498 type strain 53.6% 2,700,869 69 2,444 ☆☆☆☆ Contig 99.17% 0.81%
SRR1151262 Lactobacillus malefermentans DSM 5705 Lactobacillus malefermentans DSM 5705 = KCTC 3548 PRJNA222257 SAMN02369504 type strain 41.0% 2,054,106 149 2,013 ☆☆☆☆ Contig 98.71% 0.48%
SRR1151264 Lactobacillus oeni DSM 19972 Lactobacillus oeni DSM 19972 PRJNA222257 SAMN02369506 type strain 37.3% 2,105,430 35 1,976 ☆☆☆☆ Scaffold 99.35% 0.81%
SRR1151270 Lactobacillus rhamnosus DSM 20021 Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 PRJNA222257 SAMN02369512 type strain 46.7% 2,945,929 42 2,738 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1552615 Lactobacillus plantarum ATCC 8014 Lactobacillus plantarum PRJNA247441 SAMN02777134 44.5% 3,234,722 46 3,024 ☆☆☆☆ Scaffold 99.35% 1.53%
SRR1554404 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999426 46.6% 2,939,279 74 2,757 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1554410 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999429 46.7% 2,872,735 66 2,686 ☆☆☆☆ Contig 99.35% 0.16%
SRR1554411 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999430 46.7% 2,873,284 66 2,684 ☆☆☆☆ Contig 99.35% 0.16%
SRR1554460 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999434 46.6% 2,943,913 117 2,752 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1554461 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999435 46.6% 2,937,794 64 2,761 ☆☆☆☆ Contig 99.35% 0.16%
SRR1561420 Pediococcus pentosaceus DSM 20336 Pediococcus pentosaceus PRJNA222257 SAMN02797817 type strain 37.3% 1,744,130 18 1,681 ☆☆☆☆ Contig 98.98% 1.79%
SRR1656307 Lactobacillus casei 867_LCAS Lactobacillus casei PRJNA267549 SAMN03198075 47.9% 3,053,608 114 2,837 ☆☆☆☆ Scaffold 99.35% 0.35%
SRR1656345 Lactobacillus rhamnosus 906_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198113 46.6% 2,927,421 143 2,724 ☆☆☆☆ Scaffold 98.71% 0.16%
SRR1656396 Lactobacillus rhamnosus 944_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198164 46.7% 2,799,164 88 2,593 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1745849 Lactobacillus kullabergensis Biut2 Lactobacillus kullabergensis PRJNA257142 SAMN03271965 type strain 35.5% 2,080,753 31 1,939 ☆☆☆☆ Scaffold 97.74% 0.78%
SRR1919932 Lactobacillus delbrueckii HMSC08B12 Lactobacillus sp. HMSC08B12 PRJNA269905 SAMN03434242 49.8% 1,953,936 171 1,850 ☆☆☆☆ Scaffold 98.39% 0.16% The organism name was inferred from ANI result. (98.5% against L. delbrueckii subsp. sunkii)
SRR2624424 Lactobacillus reuteri DSM 20016 Lactobacillus reuteri DSM 20016 PRJNA298448 SAMN04159255 type strain 38.7% 1,909,375 430 1,843 ☆☆☆☆ Contig 98.71% 0.81%
SRR447240 Lactobacillus jensenii EX849587VC05 Lactobacillus jensenii EX849587VC05 PRJNA50059 SAMN00829401 34.3% 1,529,880 97 1,465 ☆☆☆☆ Scaffold 98.71% 0.24%
SRR447242 Lactobacillus jensenii EX849587VC06 Lactobacillus jensenii EX849587VC06 PRJNA50061 SAMN00829124 34.5% 1,454,191 175 1,357 ☆☆☆☆ Scaffold 97.53% 0.16%
SRR896284 Lactobacillus ceti DSM 22408 Lactobacillus ceti DSM 22408 PRJNA185632 SAMN02199102 type strain 33.7% 1,405,335 21 1,271 ☆☆☆☆ Scaffold 97.74% 1.24%
SRR896433 Lactobacillus harbinensis DSM 16991 Lactobacillus harbinensis DSM 16991 PRJNA188920 SAMN02199295 type strain 53.1% 3,123,257 142 3,031 ☆☆☆☆ Scaffold 98.39% 2.39%
SRR950938 Lactobacillus curvatus F16 #9 Lactobacillus curvatus F16_9 PRJNA212644 SAMN00690498 41.8% 1,911,283 110 1,917 ☆☆☆☆ Contig 98.71% 1.1%
ERR203974 Lactobacillus rhamnosus B084_B Lactobacillus rhamnosus PRJEB3060 SAMEA1571078 46.8% 2,845,638 100 2,659 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR386057 Lactobacillus casei unkown Lactobacillus casei PRJEB5094 SAMEA2276817 47.7% 2,780,244 170 2,720 ☆☆☆☆ Contig 98.87% 0.27%
ERR204051 Lactobacillus rhamnosus M72_26 Lactobacillus PRJEB3060 SAMEA1571100 46.7% 2,977,872 52 2,798 ☆☆☆☆ Contig 99.35% 0.16% The organism name was inferred from ANI result. (97.7% against L. rhamnosus)
ERR387479 Lactobacillus fuchuensis DSM 14340 Lactobacillus fuchuensis PRJEB3060 SAMEA2173685 type strain 41.8% 2,114,827 72 2,016 ☆☆☆☆ Contig 97.94% 2.1%
ERR203983 Lactobacillus paracasei B086_B Lactobacillus casei PRJEB3060 SAMEA1571049 46.0% 3,139,106 152 2,996 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR1045852 Lactobacillus crispatus UMB0044 Lactobacillus crispatus PRJEB8104 SAMEA3319383 36.9% 2,190,905 257 2,235 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR298713 Lactobacillus gastricus G217_1_1 Lactobacillus gastricus PRJEB3060 SAMEA1920406 41.6% 1,947,894 43 1,962 ☆☆☆☆ Scaffold 97.5% 0.46%
ERR204037 Lactobacillus fermentum qM_11 Lactobacillus fermentum PRJEB3060 SAMEA1571123 52.1% 1,923,226 156 1,827 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR387482 Lactobacillus hammesii DSM 16381 Lactobacillus hammesii PRJEB3060 SAMEA2173688 type strain 49.4% 2,807,716 61 2,591 ☆☆☆☆ Scaffold 99.03% 0.27%
ERR386037 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276797 34.6% 1,988,087 30 1,882 ☆☆☆☆ Scaffold 98.39% 0.16%
ERR203989 Lactobacillus rhamnosus B088_A Lactobacillus rhamnosus PRJEB3060 SAMEA1571083 46.6% 2,904,681 99 2,726 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR204030 Lactobacillus fermentum M191_10 Lactobacillus fermentum PRJEB3060 SAMEA1571058 52.4% 1,868,841 100 1,838 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR386041 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276801 34.6% 2,000,097 37 1,929 ☆☆☆☆ Contig 98.82% 0.16%
ERR386051 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276811 34.6% 1,971,236 34 1,856 ☆☆☆☆ Contig 99.03% 0.16%
ERR298623 Lactobacillus gastricus G205_1_27c Lactobacillus gastricus PRJEB3060 SAMEA1920316 41.7% 1,851,446 49 1,829 ☆☆☆☆ Contig 97.5% 0.78%
ERR386035 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276795 34.6% 2,007,126 35 1,899 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR298657 Lactobacillus vaginalis G216_3_40 Lactobacillus vaginalis PRJEB3060 SAMEA1920349 40.2% 1,976,327 130 1,979 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR203965 Lactobacillus gasseri B080_C Lactobacillus gasseri PRJEB3060 SAMEA1571113 35.2% 1,989,821 20 1,947 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR256992 Lactobacillus paracasei FLI001 Lactobacillus paracasei PRJEB3012 SAMEA1710488 46.3% 2,997,732 88 2,904 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR387491 Lactobacillus crustorum LMG_23699 Lactobacillus crustorum PRJEB3060 SAMEA2173697 35.0% 2,220,520 91 2,165 ☆☆☆☆ Contig 99.14% 1.77%
ERR387500 Lactobacillus parabuchneri DSM 5707 Lactobacillus parabuchneri PRJEB3060 SAMEA2173706 type strain 43.4% 2,563,602 48 2,370 ☆☆☆☆ Contig 98.71% 0.81%
ERR387503 Lactobacillus amylovorus DSM 16698 Lactobacillus amylovorus PRJEB3060 SAMEA2173709 37.8% 1,979,726 131 1,947 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387511 Lactobacillus kalixensis DSM 16043 Lactobacillus kalixensis PRJEB3060 SAMEA2173717 type strain 36.1% 2,073,008 98 1,937 ☆☆☆☆ Scaffold 99.03% 0.81%
ERR387548 Lactobacillus ingluviei DSM 14792 Lactobacillus ingluviei PRJEB3060 SAMEA2173754 50.0% 2,100,726 110 1,999 ☆☆☆☆ Scaffold 98.23% 0.4%
ERR433461 Lactobacillus algidus DSM 15638 Lactobacillus algidus PRJEB3060 SAMEA2201861 type strain 36.0% 1,590,299 31 1,530 ☆☆☆☆ Contig 97.61% 0.81%
ERR433473 Lactobacillus fructivorans ATCC 27394 Lactobacillus fructivorans PRJEB3060 SAMEA2203406 38.8% 1,411,344 9 1,468 ☆☆☆☆ Contig 97.26% 0.43%
ERR433480 Lactobacillus panis DSM 6035 Lactobacillus panis PRJEB3060 SAMEA2203414 type strain 48.1% 1,986,542 145 1,888 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR433481 Lactobacillus parabrevis LMG_11984 Lactobacillus parabrevis PRJEB3060 SAMEA2203415 49.0% 2,632,219 132 2,376 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR433485 Lactobacillus paralimentarius DSM 13961 Lactobacillus paralimentarius PRJEB3060 SAMEA2203419 35.1% 2,744,199 29 2,631 ☆☆☆☆ Contig 99.14% 4.22%
ERR433488 Lactobacillus plantarum DSM 13273 Lactobacillus plantarum PRJEB3060 SAMEA2203422 44.3% 3,416,139 77 3,242 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR433494 Lactobacillus saniviri DSM 24301 Lactobacillus saniviri PRJEB3060 SAMEA2203428 type strain 47.7% 2,429,351 62 2,409 ☆☆☆☆ Scaffold 98.87% 0.7%
ERR485021 Lactobacillus gasseri G218_1_1 Lactobacillus gasseri PRJEB3060 SAMEA1920318 34.7% 2,003,445 71 1,985 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR485050 Lactobacillus fermentum G208_1_3 Lactobacillus fermentum PRJEB3060 SAMEA1920348 52.2% 1,932,774 141 1,877 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR485109 Lactobacillus plantarum G226_2_10 Lactobacillus plantarum PRJEB3060 SAMEA1920408 44.3% 3,440,375 140 3,238 ☆☆☆☆ Scaffold 99.19% 1.53%
ERR570112 Lactobacillus fermentum G210_2_16 Lactobacillus fermentum PRJEB3060 SAMEA2437604 51.6% 2,120,923 148 2,115 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR570116 Lactobacillus salivarius G210_4_1 Lactobacillus salivarius PRJEB3060 SAMEA2437608 32.6% 1,825,885 37 1,759 ☆☆☆☆ Contig 97.1% 0.16%
ERR570127 Lactobacillus fermentum G220_5_26 Lactobacillus fermentum PRJEB3060 SAMEA2437619 52.3% 1,892,642 95 1,851 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570128 Lactobacillus salivarius G221_1_1 Lactobacillus salivarius PRJEB3060 SAMEA2437620 33.0% 2,040,663 43 2,000 ☆☆☆☆ Scaffold 99.03% 0.81%
ERR570136 Lactobacillus rhamnosus G231_2_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437628 46.6% 2,952,114 36 2,753 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570141 Lactobacillus rhamnosus G231_5_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437633 46.6% 2,952,409 39 2,757 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570142 Lactobacillus fermentum G231_5_8 Lactobacillus fermentum PRJEB3060 SAMEA2437634 52.1% 1,939,540 100 1,898 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR570145 Lactobacillus plantarum G238_1_1 Lactobacillus plantarum PRJEB3060 SAMEA2437637 44.4% 3,270,238 68 3,080 ☆☆☆☆ Scaffold 99.03% 1.53%
ERR570148 Lactobacillus gasseri G238_2_1 Lactobacillus gasseri PRJEB3060 SAMEA2437640 34.8% 2,115,225 69 2,101 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR570161 Lactobacillus fermentum G242_1_5 Lactobacillus fermentum PRJEB3060 SAMEA2437653 51.5% 2,056,516 157 2,076 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570179 Lactobacillus rhamnosus G254_2_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437671 46.6% 2,963,035 19 2,763 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570184 Lactobacillus rhamnosus G255_2_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437676 46.6% 2,914,297 78 2,728 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570185 Lactobacillus fermentum G255_3_1 Lactobacillus fermentum PRJEB3060 SAMEA2437677 51.6% 2,107,025 132 2,089 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR570201 Lactobacillus oris G257_3_4 Lactobacillus oris PRJEB3060 SAMEA2437693 49.5% 2,251,497 100 2,209 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR570203 Lactobacillus paracasei G257_4_3 Lactobacillus sp. PRJEB3060 SAMEA2437695 46.2% 2,944,490 43 2,806 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570229 Lactobacillus helveticus G270_6_3 Lactobacillus sp. PRJEB3060 SAMEA2437721 36.5% 1,985,177 171 2,038 ☆☆☆☆ Scaffold 98.23% 0.16% The organism name was inferred from ANI result. (97.9% against L. helveticus)
ERR570235 Lactobacillus paracasei G272_5_8 Lactobacillus sp. PRJEB3060 SAMEA2437727 46.2% 3,072,867 71 2,904 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570238 Lactobacillus fermentum G273_1_6 Lactobacillus fermentum PRJEB3060 SAMEA2437730 52.1% 1,922,536 141 1,874 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570240 Lactobacillus fermentum G273_2_3 Lactobacillus fermentum PRJEB3060 SAMEA2437732 52.1% 1,917,023 132 1,873 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570244 Lactobacillus vaginalis G273_5_6 Lactobacillus vaginalis PRJEB3060 SAMEA2437736 40.5% 1,782,121 66 1,732 ☆☆☆☆ Contig 99.19% 0.81%
ERR570260 Lactobacillus oris G277_6_1 Lactobacillus oris PRJEB3060 SAMEA2437752 49.9% 2,092,084 85 2,007 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR570261 Lactobacillus salivarius G278_1_13 Lactobacillus salivarius PRJEB3060 SAMEA2437753 32.8% 1,923,435 40 1,885 ☆☆☆☆ Contig 99.03% 0.16%
ERR570263 Lactobacillus plantarum G278_1_3 Lactobacillus sp. PRJEB3060 SAMEA2437755 44.3% 3,361,007 69 3,171 ☆☆☆☆ Scaffold 99.35% 1.53% The organism name was inferred from ANI result. (99.2% against L. plantarum subsp. plantarum)
ERR570264 Lactobacillus mucosae G278_2_1 Lactobacillus mucosae PRJEB3060 SAMEA2437756 46.6% 2,161,736 27 2,023 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR570280 Lactobacillus gasseri G279_5_4 Lactobacillus gasseri PRJEB3060 SAMEA2437772 34.7% 1,895,856 20 1,875 ☆☆☆☆ Contig 99.35% 0.16%
SRR1151129 Lactobacillus paracasei subsp. tolerans DSM 20258 Lactobacillus paracasei subsp. tolerans DSM 20258 PRJNA222257 SAMN02369371 type strain 46.4% 2,413,718 349 2,419 ☆☆☆☆ Scaffold 99.35% 0.48%
SRR1151132 Lactobacillus concavus DSM 17758 Lactobacillus concavus DSM 17758 PRJNA222257 SAMN02369374 type strain 43.3% 1,903,092 83 1,765 ☆☆☆☆ Scaffold 99.35% 0.87%
SRR1151140 Lactobacillus psittaci DSM 15354 Lactobacillus psittaci DSM 15354 PRJNA222257 SAMN02369382 type strain 35.7% 1,542,258 20 1,345 ☆☆☆☆ Contig 98.06% 0.16%
SRR1151161 Lactobacillus intestinalis DSM 6629 Lactobacillus intestinalis DSM 6629 PRJNA222257 SAMN02369403 type strain 35.4% 1,985,258 36 1,823 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151171 Lactobacillus saerimneri DSM 16049 Lactobacillus saerimneri DSM 16049 PRJNA222257 SAMN02369413 type strain 42.6% 1,706,037 58 1,698 ☆☆☆☆ Contig 98.71% 0.16%
SRR1151187 Lactobacillus oligofermentans DSM 15707 Lactobacillus oligofermentans DSM 15707 = LMG 22743 PRJNA222257 SAMN02369429 type strain 35.5% 1,789,353 10 1,722 ☆☆☆☆ Contig 99.35% 0.27%
SRR1151193 Lactobacillus plantarum subsp. plantarum CGMCC 1.2437 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA222257 SAMN02369435 type strain 44.5% 3,220,167 19 3,019 ☆☆☆☆ Scaffold 99.03% 1.53%
SRR1151197 Lactobacillus cacaonum DSM 21116 Lactobacillus cacaonum DSM 21116 PRJNA222257 SAMN02369439 type strain 33.9% 1,917,961 15 1,823 ☆☆☆☆ Contig 98.71% 0.16%
SRR1151213 Lactobacillus kefiri DSM 20587 Lactobacillus kefiri DSM 20587 = JCM 5818 PRJNA222257 SAMN02369455 type strain 41.5% 2,445,374 123 2,343 ☆☆☆☆ Contig 98.39% 0.81%
SRR1151214 Lactobacillus kimchicus JCM 15530 Lactobacillus kimchicus JCM 15530 PRJNA222257 SAMN02369456 type strain 46.6% 2,593,829 30 2,511 ☆☆☆☆ Contig 99.03% 0.56%
SRR1151216 Lactobacillus kisonensis DSM 19906 Lactobacillus kisonensis DSM 19906 = JCM 15041 PRJNA222257 SAMN02369458 type strain 41.8% 3,017,560 102 2,765 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151217 Lactobacillus koreensis JCM 16448 Lactobacillus koreensis JCM 16448 PRJNA222257 SAMN02369459 type strain 49.2% 2,940,897 113 2,666 ☆☆☆☆ Scaffold 99.35% 0.89%
SRR1151227 Lactobacillus perolens DSM 12744 Lactobacillus perolens DSM 12744 PRJNA222257 SAMN02369469 type strain 49.2% 3,269,427 31 3,106 ☆☆☆☆ Scaffold 98.71% 1.96%
SRR1151248 Lactobacillus namurensis DSM 19117 Lactobacillus namurensis DSM 19117 PRJNA222257 SAMN02369490 type strain 52.0% 2,471,330 67 2,226 ☆☆☆☆ Contig 100.0% 0.16%
SRR1151254 Lactobacillus sanfranciscensis DSM 20451 Lactobacillus sanfranciscensis DSM 20451 PRJNA222257 SAMN02369496 type strain 34.7% 1,253,219 51 1,278 ☆☆☆☆ Scaffold 99.17% 0.39%
SRR1502204 Lactobacillus kunkeei EFB6 Lactobacillus kunkeei EFB6 PRJNA227106 SAMN02767920 37.0% 1,535,062 59 1,381 ☆☆☆☆ Scaffold 97.58% 0.48%
SRR1561416 Pediococcus inopinatus DSM 20285 Pediococcus inopinatus PRJNA222257 SAMN02797814 type strain 38.6% 2,099,392 118 2,028 ☆☆☆ Scaffold 92.26% 8.84%
SRR1656306 Lactobacillus salivarius 866_LSAL Lactobacillus salivarius PRJNA267549 SAMN03198074 32.6% 1,947,291 82 1,901 ☆☆☆☆ Scaffold 99.03% 0.48%
SRR1922809 Lactobacillus rhamnosus HMSC17G08 Lactobacillus sp. HMSC17G08 PRJNA269805 SAMN03436201 46.7% 2,850,689 52 2,637 ☆☆☆☆ Scaffold 99.35% 0.16% The organism name was inferred from ANI result. (97.5% against L. rhamnosus)
SRR2095367 Lactobacillus gasseri unkown Lactobacillus gasseri PRJNA272102 SAMN03854352 34.9% 1,915,277 75 1,884 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR515127 Lactobacillus crispatus FB077-07 Lactobacillus crispatus FB077-07 PRJNA52105 SAMN01057067 36.6% 2,384,356 257 2,438 ☆☆☆☆ Scaffold 99.03% 0.56%
SRR896357 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae DSM 15814 PRJNA185359 SAMN02199251 type strain 43.3% 2,867,754 49 2,706 ☆☆☆☆ Contig 99.35% 2.1%
ERR386024 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276784 34.6% 1,970,210 39 1,854 ☆☆☆☆ Contig 99.03% 0.16%
ERR386028 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276788 34.6% 1,962,510 39 1,845 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR298674 Lactobacillus paracasei G218_5_1 Lactobacillus casei PRJEB3060 SAMEA1920369 46.3% 3,074,526 103 2,900 ☆☆☆☆ Scaffold 99.03% 0.48% The organism name was amended based on the ANI result.
ERR203981 Lactobacillus gasseri B085_D Lactobacillus gasseri PRJEB3060 SAMEA1571085 35.1% 1,850,289 19 1,770 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387520 Lactobacillus psittaci DSM 15354 Lactobacillus psittaci PRJEB3060 SAMEA2173726 type strain 35.7% 1,542,511 17 1,344 ☆☆☆☆ Contig 98.06% 0.16%
ERR485029 Lactobacillus gastricus G218_1_3 Lactobacillus gastricus PRJEB3060 SAMEA1920330 41.6% 1,948,226 42 1,961 ☆☆☆☆ Contig 97.5% 0.46%
ERR433490 Lactobacillus pontis DSM 8475 Lactobacillus pontis PRJEB3060 SAMEA2203424 type strain 53.5% 1,652,585 66 1,609 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570130 Lactobacillus fermentum G222_5_1 Lactobacillus fermentum PRJEB3060 SAMEA2437622 52.2% 1,946,394 120 1,918 ☆☆☆☆ Scaffold 98.79% 0.48%
ERR203997 Lactobacillus salivarius ATCC 11741 Lactobacillus salivarius PRJEB3060 SAMEA1571047 type strain 32.5% 1,990,429 40 1,927 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR204040 Lactobacillus paracasei M95_18 Lactobacillus paracasei PRJEB3060 SAMEA1571104 46.3% 3,051,406 102 2,897 ☆☆☆☆ Scaffold 99.35% 0.7%
ERR387489 Lactobacillus floricola DSM 23037 Lactobacillus floricola PRJEB3060 SAMEA2173695 type strain 34.5% 1,287,117 17 1,247 ☆☆☆☆ Contig 95.35% 1.45%
ERR298698 Lactobacillus oris G224_2_6 Lactobacillus oris PRJEB3060 SAMEA1920391 49.7% 2,138,775 99 2,048 ☆☆☆☆ Scaffold 99.35% 0.89%
ERR387549 Lactobacillus tucceti DSM 20183 Lactobacillus tucceti PRJEB3060 SAMEA2173755 type strain 34.1% 2,170,671 45 2,102 ☆☆☆☆ Contig 99.14% 1.38%
ERR386059 Lactobacillus plantarum unkown Lactobacillus plantarum PRJEB5094 SAMEA2276819 44.5% 3,220,634 29 3,019 ☆☆☆☆ Scaffold 99.03% 1.53%
ERR386043 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276803 34.6% 1,958,652 39 1,877 ☆☆☆☆ Scaffold 98.94% 0.22%
ERR485019 Lactobacillus rhamnosus G211_1_25 Lactobacillus rhamnosus PRJEB3060 SAMEA1920317 46.7% 2,872,174 70 2,661 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR433483 Lactobacillus paracollinoides DSM 15502 Lactobacillus paracollinoides PRJEB3060 SAMEA2203417 type strain 46.9% 3,396,610 283 3,146 ☆☆☆☆ Scaffold 98.95% 1.13%
ERR203995 Lactobacillus paracasei ATCC 25598 Lactobacillus paracasei PRJEB3060 SAMEA1571106 46.2% 3,066,346 167 2,893 ☆☆☆☆ Scaffold 98.71% 0.48%
ERR387483 Lactobacillus acidifarinae DSM 19394 Lactobacillus acidifarinae PRJEB3060 SAMEA2173689 type strain 51.6% 2,913,834 27 2,738 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR570117 Lactobacillus gasseri G210_4_6 Lactobacillus gasseri PRJEB3060 SAMEA2437609 34.7% 1,900,164 33 1,853 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387486 Lactobacillus amylotrophicus DSM 20534 Lactobacillus amylotrophicus PRJEB3060 SAMEA2173692 type strain 42.6% 1,600,645 22 1,602 ☆☆☆☆ Contig 97.31% 2.18%
ERR387501 Lactobacillus vaccinostercus DSM 20634 Lactobacillus vaccinostercus PRJEB3060 SAMEA2173707 type strain 43.5% 2,553,579 59 2,440 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR386029 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276789 34.6% 1,969,597 38 1,853 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387504 Lactobacillus murinus DSM 20452 Lactobacillus murinus PRJEB3060 SAMEA2173710 type strain 40.0% 2,159,096 115 2,030 ☆☆☆☆ Scaffold 99.14% 0.48%
ERR298627 Lactobacillus plantarum G226_4_1 Lactobacillus plantarum PRJEB3060 SAMEA1920321 44.2% 3,480,295 142 3,271 ☆☆☆☆ Scaffold 99.19% 2.18%
ERR387484 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 Lactobacillus kefiranofaciens subsp. kefirgranum PRJEB3060 SAMEA2173690 type strain 37.4% 2,028,392 241 2,020 ☆☆☆☆ Scaffold 97.96% 0.59%
ERR485028 Lactobacillus crispatus G216_1_31 Lactobacillus crispatus PRJEB3060 SAMEA1920326 36.8% 2,151,281 107 2,131 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387539 Lactobacillus senmaizukei DSM 21775 Lactobacillus senmaizukei PRJEB3060 SAMEA2173745 type strain 48.6% 2,219,998 79 2,122 ☆☆☆☆ Scaffold 98.39% 0.16%
ERR386030 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276790 34.6% 1,969,337 40 1,854 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR570115 Lactobacillus oris G210_3_7 Lactobacillus oris PRJEB3060 SAMEA2437607 49.8% 2,087,760 105 1,974 ☆☆☆☆ Contig 99.19% 0.24%
ERR203972 Lactobacillus rhamnosus B081_E Lactobacillus rhamnosus PRJEB3060 SAMEA1571089 46.4% 3,070,051 124 2,901 ☆☆☆☆ Scaffold 99.35% 0.29%
ERR387525 Lactobacillus hordei DSM 19519 Lactobacillus hordei PRJEB3060 SAMEA2173731 type strain 34.8% 2,287,468 119 2,239 ☆☆☆☆ Scaffold 98.39% 0.24%
ERR298663 Lactobacillus antri G208_2_32 Lactobacillus antri PRJEB3060 SAMEA1920356 50.9% 2,275,122 126 2,157 ☆☆☆☆ Scaffold 99.26% 0.24%
ERR387499 Lactobacillus ingluviei DSM 15946 Lactobacillus ingluviei PRJEB3060 SAMEA2173705 type strain 49.9% 2,138,634 76 2,086 ☆☆☆☆ Scaffold 98.23% 0.54%
ERR203966 Lactobacillus rhamnosus B080_D Lactobacillus rhamnosus PRJEB3060 SAMEA1571120 46.7% 2,953,223 137 2,801 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR386044 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276804 34.6% 1,969,423 47 1,851 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR570146 Lactobacillus fermentum G238_1_16 Lactobacillus fermentum PRJEB3060 SAMEA2437638 51.7% 2,002,190 161 1,954 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570147 Lactobacillus rhamnosus G238_1_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437639 46.6% 2,962,514 28 2,758 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570157 Lactobacillus vaginalis G241_2_47 Lactobacillus vaginalis PRJEB3060 SAMEA2437649 40.5% 1,784,704 74 1,770 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR570175 Lactobacillus fermentum G246_6_21 Lactobacillus fermentum PRJEB3060 SAMEA2437667 52.3% 1,922,520 123 1,874 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570198 Lactobacillus paracasei G257_2_2 Lactobacillus casei PRJEB3060 SAMEA2437690 46.2% 2,944,390 39 2,807 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was amended based on the ANI result.
ERR570207 Lactobacillus paracasei G257_6_3 Lactobacillus sp. PRJEB3060 SAMEA2437699 46.2% 3,087,231 146 2,938 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570211 Lactobacillus mucosae G260_4_15 Lactobacillus sp. PRJEB3060 SAMEA2437703 46.6% 2,108,912 59 1,950 ☆☆☆☆ Scaffold 99.03% 0.16% The organism name was inferred from ANI result. (97.0% against L. mucosae)
ERR570216 Lactobacillus rhamnosus G260_5_23 Lactobacillus rhamnosus PRJEB3060 SAMEA2437708 46.6% 2,992,407 35 2,789 ☆☆☆☆ Scaffold 98.71% 0.16%
ERR570222 Lactobacillus fermentum G266_2_19 Lactobacillus fermentum PRJEB3060 SAMEA2437714 52.2% 1,932,881 99 1,894 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570231 Lactobacillus paracasei G272_1_1 Lactobacillus sp. PRJEB3060 SAMEA2437723 46.3% 3,048,922 75 2,876 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570233 Lactobacillus paracasei G272_4_1 Lactobacillus sp. PRJEB3060 SAMEA2437725 46.3% 3,009,194 71 2,815 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570234 Lactobacillus parabuchneri G272_5_7 Lactobacillus parabuchneri PRJEB3060 SAMEA2437726 43.5% 2,538,450 108 2,423 ☆☆☆☆ Scaffold 98.63% 0.16%
ERR570236 Lactobacillus paracasei G272_6_8 Lactobacillus sp. PRJEB3060 SAMEA2437728 46.3% 2,923,619 47 2,735 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570251 Lactobacillus rhamnosus G277_2_4 Lactobacillus rhamnosus PRJEB3060 SAMEA2437743 46.5% 3,089,841 79 2,969 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570253 Lactobacillus gasseri G277_3_1 Lactobacillus gasseri PRJEB3060 SAMEA2437745 34.8% 1,977,080 42 1,918 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570256 Lactobacillus gasseri G277_4_7 Lactobacillus gasseri PRJEB3060 SAMEA2437748 34.6% 2,043,156 15 1,964 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570274 Lactobacillus salivarius G279_2_16 Lactobacillus salivarius PRJEB3060 SAMEA2437766 32.8% 1,993,914 35 1,982 ☆☆☆☆ Scaffold 99.03% 0.38%
ERR570279 Lactobacillus salivarius G279_5_1 Lactobacillus salivarius PRJEB3060 SAMEA2437771 32.8% 1,990,150 31 1,977 ☆☆☆☆ Scaffold 99.03% 0.38%
ERR900644 Lactobacillus vaginalis G303_2_1 Lactobacillus vaginalis PRJEB3060 SAMEA3206624 40.5% 1,860,962 57 1,806 ☆☆☆☆ Scaffold 99.35% 0.81%
SRR1151125 Lactobacillus curvatus DSM 20019 Lactobacillus curvatus JCM 1096 = DSM 20019 PRJNA222257 SAMN02369367 type strain 42.0% 1,807,340 134 1,814 ☆☆☆☆ Scaffold 98.71% 0.24%
SRR1151134 Lactobacillus paracollinoides DSM 15502 Lactobacillus paracollinoides DSM 15502 = JCM 11969 PRJNA222257 SAMN02369376 type strain 46.9% 3,470,681 137 3,214 ☆☆☆☆ Contig 98.95% 1.13%
SRR1151135 Lactobacillus sharpeae DSM 20505 Lactobacillus sharpeae JCM 1186 = DSM 20505 PRJNA222257 SAMN02369377 type strain 53.4% 2,436,540 66 2,342 ☆☆☆☆ Contig 97.98% 1.53%
SRR1151139 Lactobacillus johnsonii ATCC 33200 Lactobacillus johnsonii ATCC 33200 PRJNA222257 SAMN02369381 type strain 34.4% 1,770,443 15 1,767 ☆☆☆☆ Contig 99.25% 0.16%
SRR1151148 Lactobacillus antri DSM 16041 Lactobacillus antri DSM 16041 PRJNA222257 SAMN02369390 type strain 51.1% 2,249,658 83 2,113 ☆☆☆☆ Scaffold 99.26% 0.24%
SRR1151152 Lactobacillus coleohominis DSM 14060 Lactobacillus coleohominis DSM 14060 PRJNA222257 SAMN02369394 type strain 41.1% 1,865,893 33 1,979 ☆☆☆☆ Contig 99.84% 0.81%
SRR1151154 Lactobacillus gallinarum DSM 10532 Lactobacillus gallinarum DSM 10532 = JCM 2011 PRJNA222257 SAMN02369396 type strain 36.5% 1,903,892 80 1,887 ☆☆☆☆ Contig 99.03% 0.16%
SRR1151188 Lactobacillus sakei subsp. carnosus DSM 15831 Lactobacillus sakei subsp. carnosus DSM 15831 PRJNA222257 SAMN02369430 type strain 41.0% 1,974,273 58 1,982 ☆☆☆☆ Scaffold 98.71% 0.16%
SRR1151189 Lactobacillus tucceti DSM 20183 Lactobacillus tucceti DSM 20183 PRJNA222257 SAMN02369431 type strain 34.1% 2,170,146 47 2,104 ☆☆☆☆ Contig 99.14% 1.38%
SRR1151192 Lactobacillus camelliae DSM 22697 Lactobacillus camelliae DSM 22697 = JCM 13995 PRJNA222257 SAMN02369434 type strain 55.4% 2,558,612 99 2,402 ☆☆☆☆ Scaffold 99.35% 1.32%
SRR1151195 Lactobacillus paralimentarius DSM 19674 Lactobacillus paralimentarius DSM 19674 PRJNA222257 SAMN02369437 35.3% 2,881,353 30 2,800 ☆☆☆☆ Contig 98.82% 2.77%
SRR1151212 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 PRJNA222257 SAMN02369454 type strain 37.5% 2,084,861 110 2,099 ☆☆☆☆ Scaffold 99.03% 0.38%
SRR1151230 Lactobacillus rapi DSM 19907 Lactobacillus rapi DSM 19907 = JCM 15042 PRJNA222257 SAMN02369472 type strain 42.9% 2,848,015 88 2,645 ☆☆☆☆ Contig 99.03% 0.16%
SRR1151244 Lactobacillus crustorum JCM 15951 Lactobacillus crustorum JCM 15951 PRJNA222257 SAMN02369486 type strain 35.0% 2,219,785 92 2,163 ☆☆☆☆ Contig 99.14% 1.77%
SRR1151253 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae DSM 15814 PRJNA222257 SAMN02369495 type strain 43.3% 2,864,989 58 2,701 ☆☆☆☆ Scaffold 99.35% 2.1%
SRR1151263 Lactobacillus nagelii DSM 13675 Lactobacillus nagelii DSM 13675 PRJNA222257 SAMN02369505 type strain 36.7% 2,465,933 40 2,380 ☆☆☆☆ Contig 99.35% 2.16%
SRR1151267 Lactobacillus sakei subsp. sakei DSM 20017 Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 PRJNA222257 SAMN02369509 type strain 41.1% 1,907,928 38 1,891 ☆☆☆☆ Contig 98.71% 0.16%
SRR1151268 Lactobacillus satsumensis DSM 16230 Lactobacillus satsumensis DSM 16230 = JCM 12392 PRJNA222257 SAMN02369510 type strain 39.9% 2,632,301 58 2,437 ☆☆☆☆ Scaffold 99.35% 0.7%
SRR1552084 Lactobacillus plantarum subsp. plantarum ATCC 14917 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA247439 SAMN02777136 type strain 44.5% 3,223,841 26 3,026 ☆☆☆☆ Scaffold 99.03% 1.53%
SRR1554393 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999427 46.6% 2,939,143 72 2,755 ☆☆☆☆ Contig 99.35% 0.16%
SRR1656332 Lactobacillus rhamnosus 893_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198100 46.5% 2,924,614 109 2,729 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1752113 Lactobacillus kunkeei LMbo Lactobacillus kunkeei PRJNA270973 SAMN03277051 36.6% 1,530,362 23 1,395 ☆☆☆☆ Contig 97.9% 0.81%
SRR1752129 Lactobacillus apinorum Fhon13 Lactobacillus apinorum PRJNA270968 SAMN03275710 type strain 34.6% 1,428,890 29 1,317 ☆☆☆☆ Contig 97.9% 0.48%
SRR1923050 Lactobacillus paracasei HMSC25A02 Lactobacillus sp. HMSC25A02 PRJNA269832 SAMN03436219 46.3% 2,964,989 107 2,788 ☆☆☆☆ Scaffold 98.71% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
SRR896450 Lactobacillus psittaci DSM 15354 Lactobacillus psittaci DSM 15354 PRJNA188921 SAMN02199312 type strain 35.7% 1,542,607 18 1,343 ☆☆☆☆ Scaffold 98.06% 0.16%
ERR387485 Lactobacillus delbrueckii subsp. lactis DSM 20076 Lactobacillus delbrueckii subsp. lactis PRJEB3060 SAMEA2173691 50.1% 1,831,983 86 1,765 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR298647 Lactobacillus rhamnosus G208_1_2 Lactobacillus rhamnosus PRJEB3060 SAMEA1920340 46.7% 2,914,510 53 2,699 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387461 Lactobacillus hayakitensis DSM 18933 Lactobacillus hayakitensis PRJEB3060 SAMEA2173667 type strain 34.0% 1,636,658 67 1,543 ☆☆☆☆ Scaffold 97.37% 0.08%
ERR387534 Lactobacillus helveticus LMG_22464 Lactobacillus helveticus PRJEB3060 SAMEA2173740 36.5% 1,752,328 232 1,825 ☆☆☆☆ Scaffold 97.58% 0.16%
ERR298651 Lactobacillus fermentum G229_2_12 Lactobacillus fermentum PRJEB3060 SAMEA1920344 51.7% 2,036,501 167 2,014 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR298632 Lactobacillus parabuchneri G211_1_6 Lactobacillus parabuchneri PRJEB3060 SAMEA1920325 43.5% 2,554,725 135 2,355 ☆☆☆☆ Scaffold 99.14% 0.89%
ERR256993 Lactobacillus reuteri FLI002 Lactobacillus reuteri PRJEB3012 SAMEA1710509 38.6% 2,159,410 165 2,221 ☆☆☆☆ Scaffold 98.71% 0.16%
ERR204034 Lactobacillus gasseri M191_9 Lactobacillus gasseri PRJEB3060 SAMEA1571060 34.7% 1,926,664 37 1,877 ☆☆☆☆ Contig 99.35% 0.16%
ERR203998 Lactobacillus casei ATCC 393 Lactobacillus casei PRJEB3060 SAMEA1571073 type strain 47.7% 2,804,069 194 2,730 ☆☆☆☆ Scaffold 98.87% 0.27%
ERR386055 Lactobacillus gasseri unkown Lactobacillus gasseri PRJEB5094 SAMEA2276815 35.0% 1,828,538 20 1,748 ☆☆☆☆ Scaffold 98.71% 0.16%
ERR298682 Lactobacillus paracasei G221_5_39 Lactobacillus casei PRJEB3060 SAMEA1920375 46.2% 3,107,456 135 2,987 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR387462 Lactobacillus fermentum DSM 20055 Lactobacillus fermentum PRJEB3060 SAMEA2173668 52.4% 1,884,015 96 1,856 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR204052 Lactobacillus fermentum M87_28 Lactobacillus fermentum PRJEB3060 SAMEA1571071 52.2% 1,900,330 149 1,822 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR204050 Lactobacillus salivarius M57_8 Lactobacillus salivarius PRJEB3060 SAMEA1571126 32.9% 1,927,801 60 1,886 ☆☆☆☆ Scaffold 97.1% 0.16%
ERR204057 Lactobacillus fermentum M89_27 Lactobacillus fermentum PRJEB3060 SAMEA1571041 51.8% 1,967,504 165 1,896 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR433471 Lactobacillus dextrinicus DSM 20335 Lactobacillus dextrinicus PRJEB3060 SAMEA2203404 type strain 38.0% 1,803,850 22 1,722 ☆☆☆☆ Contig 98.47% 1.66%
ERR1045855 Lactobacillus jensenii UMB0007 Lactobacillus jensenii PRJEB8104 SAMEA3319387 34.3% 1,487,763 64 1,420 ☆☆☆☆ Scaffold 98.71% 0.24%
ERR433472 Lactobacillus fructivorans DSM 20350 Lactobacillus fructivorans PRJEB3060 SAMEA2203405 38.9% 1,373,062 40 1,365 ☆☆☆☆ Contig 97.9% 0.43%
ERR570151 Lactobacillus plantarum G238_4_1 Lactobacillus plantarum PRJEB3060 SAMEA2437643 44.4% 3,280,857 74 3,088 ☆☆☆☆ Scaffold 99.03% 1.53%
ERR386058 Lactobacillus plantarum unkown Lactobacillus plantarum PRJEB5094 SAMEA2276818 44.5% 3,205,896 35 3,000 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR203964 Lactobacillus gasseri B080_B Lactobacillus gasseri PRJEB3060 SAMEA1571040 34.7% 1,950,205 10 1,842 ☆☆☆☆ Contig 99.35% 0.16%
ERR387538 Lactobacillus senioris DSM 24302 Lactobacillus senioris PRJEB3060 SAMEA2173744 type strain 39.1% 1,565,093 10 1,566 ☆☆☆☆ Contig 99.3% 1.21%
ERR570165 Lactobacillus paracasei G242_2_44 Lactobacillus sp. PRJEB3060 SAMEA2437657 46.3% 2,870,137 50 2,788 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR485060 Lactobacillus fermentum G216_3_41 Lactobacillus fermentum PRJEB3060 SAMEA1920357 51.6% 2,050,708 146 2,013 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR433463 Lactobacillus acidipiscis DSM 15353 Lactobacillus acidipiscis PRJEB3060 SAMEA2201862 39.0% 2,278,045 276 2,139 ☆☆☆☆ Scaffold 98.39% 1.34%
ERR570159 Lactobacillus fermentum G241_5_1 Lactobacillus fermentum PRJEB3060 SAMEA2437651 51.8% 2,015,809 95 2,007 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR485090 Lactobacillus salivarius G210_2_1 Lactobacillus salivarius PRJEB3060 SAMEA1920390 32.7% 1,897,661 68 1,845 ☆☆☆☆ Scaffold 98.39% 0.16%
ERR387537 Lactobacillus secaliphilus DSM 17896 Lactobacillus secaliphilus PRJEB3060 SAMEA2173743 type strain 47.7% 1,643,112 11 1,504 ☆☆☆☆ Contig 97.58% 0.48%
ERR485075 Lactobacillus vaginalis G215_2_33 Lactobacillus vaginalis PRJEB3060 SAMEA1920373 40.2% 1,885,553 47 1,830 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR386056 Lactobacillus paracasei unkown Lactobacillus casei PRJEB5094 SAMEA2276816 46.3% 3,022,234 100 2,850 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR570123 Lactobacillus rhamnosus G215_5_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437615 46.6% 2,930,351 80 2,744 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387514 Lactobacillus nodensis DSM 19682 Lactobacillus nodensis PRJEB3060 SAMEA2173720 type strain 37.6% 2,679,386 24 2,651 ☆☆☆☆ Scaffold 99.14% 0.16%
ERR485026 Lactobacillus parabuchneri G205_1_37 Lactobacillus parabuchneri PRJEB3060 SAMEA1920324 43.4% 2,700,242 118 2,487 ☆☆☆☆ Scaffold 98.63% 0.81%
ERR204044 Lactobacillus helveticus G205_BL_30 Lactobacillus helveticus PRJEB3060 SAMEA1571068 36.5% 1,963,872 189 2,014 ☆☆☆☆ Scaffold 98.87% 0.16%
ERR570188 Lactobacillus paracasei G256_2_1 Lactobacillus sp. PRJEB3060 SAMEA2437680 46.4% 2,769,754 160 2,655 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.7% against L. paracasei subsp. paracasei)
ERR570163 Lactobacillus plantarum G242_2_19 Lactobacillus sp. PRJEB3060 SAMEA2437655 44.4% 3,223,177 148 3,078 ☆☆☆☆ Scaffold 99.35% 2.18% The organism name was inferred from ANI result. (98.9% against L. plantarum subsp. plantarum)
ERR386036 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276796 34.6% 2,015,418 52 1,898 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR298643 Lactobacillus paracasei G229_1_32 Lactobacillus casei PRJEB3060 SAMEA1920336 46.3% 2,986,114 103 2,874 ☆☆☆☆ Contig 99.35% 0.48% The organism name was amended based on the ANI result.
ERR1045815 Lactobacillus crispatus UMB0824 Lactobacillus crispatus PRJEB8104 SAMEA3319265 36.7% 2,149,174 106 2,130 ☆☆☆☆ Contig 99.03% 0.16%
ERR387467 Lactobacillus farraginis DSM 18382 Lactobacillus farraginis PRJEB3060 SAMEA2173673 type strain 42.0% 2,793,121 225 2,670 ☆☆☆☆ Scaffold 99.03% 1.1%
ERR570135 Lactobacillus gasseri G231_2_14 Lactobacillus gasseri PRJEB3060 SAMEA2437627 34.7% 1,866,909 15 1,825 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR433500 Lactobacillus ruminis WR_207 Lactobacillus ruminis PRJEB3060 SAMEA2203434 43.4% 2,043,789 82 1,908 ☆☆☆☆ Scaffold 98.39% 1.02%
ERR387490 Lactobacillus brantae DSM 23927 Lactobacillus brantae PRJEB3060 SAMEA2173696 type strain 47.5% 1,928,783 15 1,899 ☆☆☆☆ Contig 99.19% 0.16%
ERR203979 Lactobacillus salivarius B085_B Lactobacillus salivarius PRJEB3060 SAMEA1571055 32.8% 1,993,381 69 1,976 ☆☆☆☆ Scaffold 98.39% 0.48%
ERR1045798 Lactobacillus crispatus UMB0040 Lactobacillus crispatus PRJEB8104 SAMEA3319350 36.8% 1,986,761 118 1,958 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387528 Lactobacillus graminis DSM 20719 Lactobacillus graminis PRJEB3060 SAMEA2173734 type strain 40.3% 1,829,440 52 1,739 ☆☆☆☆ Contig 98.39% 0.24%
ERR184021 Lactobacillus salivarius unkown Lactobacillus salivarius PRJEB3343 SAMEA1558193 32.6% 2,030,151 147 1,986 ☆☆☆☆ Scaffold 98.66% 0.48%
ERR570131 Lactobacillus rhamnosus G229_4_31 Lactobacillus rhamnosus PRJEB3060 SAMEA2437623 46.7% 2,900,859 73 2,691 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR1045795 Lactobacillus crispatus UMB0846 Lactobacillus crispatus PRJEB8104 SAMEA3319334 36.7% 2,348,823 253 2,451 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387471 Lactobacillus alimentarius DSM 20249 Lactobacillus alimentarius PRJEB3060 SAMEA2173677 type strain 35.4% 2,331,920 36 2,232 ☆☆☆☆ Contig 99.14% 1.45%
ERR570160 Lactobacillus gasseri G242_1_1 Lactobacillus gasseri PRJEB3060 SAMEA2437652 34.7% 1,956,532 41 1,926 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570150 Lactobacillus rhamnosus G238_2_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437642 46.7% 2,917,960 15 2,716 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR256998 Lactobacillus acidophilus FLI007 Lactobacillus acidophilus PRJEB3012 SAMEA1710387 34.6% 1,962,226 20 1,847 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR204055 Lactobacillus paracasei M89_2 Lactobacillus PRJEB3060 SAMEA1571094 46.2% 2,983,766 129 2,811 ☆☆☆☆ Contig 98.71% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR203993 Lactobacillus gasseri ATCC 33323 Lactobacillus gasseri PRJEB3060 SAMEA1571035 type strain 35.0% 1,823,565 17 1,742 ☆☆☆☆ Contig 98.71% 0.16%
ERR298656 Lactobacillus helveticus G211_5_34 Lactobacillus helveticus PRJEB3060 SAMEA1920350 36.5% 1,945,594 163 1,994 ☆☆☆☆ Scaffold 98.87% 0.16%
ERR433487 Lactobacillus paucivorans DSM 22467 Lactobacillus paucivorans PRJEB3060 SAMEA2203421 type strain 49.2% 2,327,316 190 2,186 ☆☆☆☆ Scaffold 99.35% 0.25%
ERR570171 Lactobacillus gasseri G242_6_1 Lactobacillus gasseri PRJEB3060 SAMEA2437663 34.8% 1,938,287 44 1,887 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387476 Lactobacillus fabifermentans DSM 21115 Lactobacillus fabifermentans PRJEB3060 SAMEA2173682 type strain 45.0% 3,271,316 175 3,111 ☆☆☆☆ Scaffold 99.03% 1.21%
ERR203968 Lactobacillus fermentum B081_A Lactobacillus fermentum PRJEB3060 SAMEA1571065 52.2% 1,892,249 151 1,844 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR387459 Lactobacillus capillatus DSM 19910 Lactobacillus capillatus PRJEB3060 SAMEA2173665 type strain 37.6% 2,224,347 49 2,107 ☆☆☆☆ Contig 99.03% 1.34%
ERR387464 Lactobacillus composti DSM 18527 Lactobacillus composti PRJEB3060 SAMEA2173670 type strain 43.9% 3,452,574 66 3,298 ☆☆☆☆ Contig 99.35% 3.28%
ERR387524 Lactobacillus mindensis DSM 14500 Lactobacillus mindensis PRJEB3060 SAMEA2173730 type strain 38.2% 2,326,589 89 2,205 ☆☆☆☆ Scaffold 99.14% 3.47%
ERR570119 Lactobacillus salivarius G210_5_1 Lactobacillus salivarius PRJEB3060 SAMEA2437611 32.8% 1,864,884 44 1,802 ☆☆☆☆ Scaffold 97.1% 0.16%
ERR485115 Lactobacillus sucicola DSM 21376 Lactobacillus sucicola PRJEB3060 SAMEA2173750 type strain 38.5% 2,456,798 17 2,265 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR386045 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276805 34.6% 1,970,832 44 1,855 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR203971 Lactobacillus oris B081_D Lactobacillus oris PRJEB3060 SAMEA1571095 49.8% 2,130,111 83 2,015 ☆☆☆☆ Scaffold 99.35% 0.24%
ERR387509 Lactobacillus equi DSM 15833 Lactobacillus equi PRJEB3060 SAMEA2173715 type strain 39.0% 2,242,504 141 2,159 ☆☆☆☆ Scaffold 98.39% 1.64%
ERR433477 Lactobacillus nantensis DSM 16982 Lactobacillus nantensis PRJEB3060 SAMEA2203411 type strain 36.2% 2,923,132 82 2,774 ☆☆☆☆ Scaffold 99.14% 2.1%
ERR433478 Lactobacillus odoratitofui DSM 19909 Lactobacillus odoratitofui PRJEB3060 SAMEA2203412 type strain 44.2% 2,747,284 26 2,403 ☆☆☆☆ Scaffold 98.71% 0.24%
ERR386042 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276802 34.6% 1,958,410 27 1,878 ☆☆☆☆ Contig 99.03% 0.22%
ERR570113 Lactobacillus gasseri G210_2_2 Lactobacillus gasseri PRJEB3060 SAMEA2437605 34.7% 1,899,806 38 1,854 ☆☆☆☆ Contig 99.35% 0.16%
ERR433491 Lactobacillus rennini DSM 20253 Lactobacillus rennini PRJEB3060 SAMEA2203425 type strain 40.7% 2,261,248 103 2,219 ☆☆☆☆ Scaffold 99.14% 3.23%
ERR204054 Lactobacillus salivarius M89_15 Lactobacillus salivarius PRJEB3060 SAMEA1571074 32.8% 1,946,433 58 1,930 ☆☆☆☆ Scaffold 97.1% 0.81%
ERR433470 Lactobacillus delbrueckii subsp. indicus DSM 15996 Lactobacillus delbrueckii subsp. indicus PRJEB3060 SAMEA2203403 type strain 49.6% 1,849,646 95 1,804 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387519 Lactobacillus perolens DSM 12744 Lactobacillus perolens PRJEB3060 SAMEA2173725 type strain 49.2% 3,266,422 41 3,103 ☆☆☆☆ Scaffold 98.71% 1.96%
ERR570154 Lactobacillus paracasei G238_5_4 Lactobacillus sp. PRJEB3060 SAMEA2437646 46.3% 3,006,985 93 2,852 ☆☆☆☆ Scaffold 98.71% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570172 Lactobacillus rhamnosus G244_1_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437664 46.6% 2,909,766 78 2,728 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387506 Lactobacillus pantheris DSM 15945 Lactobacillus pantheris PRJEB3060 SAMEA2173712 type strain 52.9% 2,531,803 45 2,293 ☆☆☆☆ Scaffold 98.39% 1.77%
ERR387463 Lactobacillus kefiri DSM 20587 Lactobacillus kefiri PRJEB3060 SAMEA2173669 type strain 41.7% 2,322,665 99 2,208 ☆☆☆☆ Contig 98.39% 0.81%
ERR387542 Lactobacillus similis DSM 23365 Lactobacillus similis PRJEB3060 SAMEA2173748 type strain 47.0% 3,452,668 153 3,084 ☆☆☆☆ Scaffold 99.35% 1.1%
ERR433486 Lactobacillus paraplantarum LMG_16673 Lactobacillus paraplantarum PRJEB3060 SAMEA2203420 43.7% 3,297,581 249 3,069 ☆☆☆☆ Scaffold 98.71% 2.72%
ERR386026 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276786 34.6% 1,963,446 34 1,848 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR433497 Lactobacillus zymae DSM 19395 Lactobacillus zymae PRJEB3060 SAMEA2203431 type strain 53.6% 2,698,615 62 2,445 ☆☆☆☆ Contig 99.16% 0.81%
ERR386047 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276807 34.6% 1,971,444 34 1,857 ☆☆☆☆ Contig 99.03% 0.16%
ERR387507 Lactobacillus hamsteri DSM 5661 Lactobacillus hamsteri PRJEB3060 SAMEA2173713 type strain 35.1% 1,790,730 68 1,712 ☆☆☆☆ Contig 98.39% 0.16%
ERR204046 Lactobacillus oris G205_BP_37_3_13 Lactobacillus oris PRJEB3060 SAMEA1571099 49.8% 2,150,108 132 2,075 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR570195 Lactobacillus gasseri G257_1_23 Lactobacillus gasseri PRJEB3060 SAMEA2437687 34.7% 1,894,855 21 1,820 ☆☆☆☆ Contig 99.35% 0.16%
ERR570200 Lactobacillus gasseri G257_3_2 Lactobacillus gasseri PRJEB3060 SAMEA2437692 34.8% 2,012,063 18 1,953 ☆☆☆☆ Contig 99.35% 0.16%
ERR570208 Lactobacillus salivarius G260_2_11 Lactobacillus salivarius PRJEB3060 SAMEA2437700 32.8% 2,021,287 82 2,008 ☆☆☆☆ Scaffold 99.03% 0.48%
ERR570214 Lactobacillus gasseri G260_4_34 Lactobacillus gasseri PRJEB3060 SAMEA2437706 34.7% 2,027,987 45 1,922 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570217 Lactobacillus salivarius G260_5_30 Lactobacillus salivarius PRJEB3060 SAMEA2437709 32.8% 2,023,676 84 2,009 ☆☆☆☆ Scaffold 99.03% 0.48%
ERR570220 Lactobacillus paracasei G266_1_3 Lactobacillus sp. PRJEB3060 SAMEA2437712 46.2% 3,076,656 146 2,906 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR570224 Lactobacillus rhamnosus G266_5_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437716 46.7% 2,916,216 107 2,744 ☆☆☆☆ Contig 99.35% 0.16%
ERR570237 Lactobacillus paracasei G273_1_2 Lactobacillus sp. PRJEB3060 SAMEA2437729 46.2% 3,036,993 75 2,914 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.3% against L. paracasei subsp. paracasei)
ERR570239 Lactobacillus rhamnosus G273_2_14 Lactobacillus rhamnosus PRJEB3060 SAMEA2437731 46.6% 2,996,229 117 2,844 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570243 Lactobacillus rhamnosus G273_5_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437735 46.7% 2,904,477 31 2,725 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR570246 Lactobacillus fermentum G274_3_1 Lactobacillus fermentum PRJEB3060 SAMEA2437738 52.1% 1,964,796 139 1,905 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570247 Lactobacillus fermentum G277_1_1 Lactobacillus fermentum PRJEB3060 SAMEA2437739 51.8% 1,999,999 135 1,974 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570248 Lactobacillus gasseri G277_1_12 Lactobacillus gasseri PRJEB3060 SAMEA2437740 34.8% 1,976,722 44 1,914 ☆☆☆☆ Contig 99.35% 0.16%
ERR570252 Lactobacillus gasseri G277_2_5 Lactobacillus gasseri PRJEB3060 SAMEA2437744 34.7% 2,034,477 82 1,994 ☆☆☆☆ Contig 99.35% 0.48%
ERR570255 Lactobacillus rhamnosus G277_4_16 Lactobacillus rhamnosus PRJEB3060 SAMEA2437747 46.5% 3,044,617 133 2,833 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570268 Lactobacillus mucosae G278_4_9 Lactobacillus sp. PRJEB3060 SAMEA2437760 46.4% 2,230,752 32 2,084 ☆☆☆☆ Contig 99.03% 0.16% The organism name was inferred from ANI result. (96.1% against L. mucosae)
ERR570271 Lactobacillus salivarius G279_1_12 Lactobacillus salivarius PRJEB3060 SAMEA2437763 32.8% 1,993,675 34 1,978 ☆☆☆☆ Scaffold 99.03% 0.38%
ERR570277 Lactobacillus gasseri G279_4_6 Lactobacillus gasseri PRJEB3060 SAMEA2437769 34.7% 1,860,391 19 1,833 ☆☆☆☆ Contig 99.35% 0.16%
ERR570281 Lactobacillus plantarum G283_1_10 Lactobacillus plantarum PRJEB3060 SAMEA2437773 44.4% 3,285,582 32 3,119 ☆☆☆☆ Scaffold 98.39% 1.53%
ERR570282 Lactobacillus paracasei G283_1_14 Lactobacillus sp. PRJEB3060 SAMEA2437774 46.2% 3,002,096 118 2,851 ☆☆☆☆ Contig 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570285 Lactobacillus plantarum G283_4_1 Lactobacillus plantarum PRJEB3060 SAMEA2437777 44.4% 3,283,937 33 3,116 ☆☆☆☆ Scaffold 98.39% 1.53%
SRR1151144 Lactobacillus versmoldensis DSM 14857 Lactobacillus versmoldensis DSM 14857 = KCTC 3814 PRJNA222257 SAMN02369386 type strain 38.3% 2,386,851 58 2,344 ☆☆☆☆ Contig 99.14% 1.04%
SRR1151146 Lactobacillus acidophilus DSM 20079 Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 PRJNA222257 SAMN02369388 type strain 35.0% 2,004,112 27 1,926 ☆☆☆☆ Scaffold 99.03% 0.22%
SRR1151147 Lactobacillus animalis DSM 20602 Lactobacillus animalis KCTC 3501 = DSM 20602 PRJNA222257 SAMN02369389 type strain 41.1% 1,878,248 44 1,812 ☆☆☆☆ Scaffold 99.09% 0.16%
SRR1151149 Lactobacillus apodemi DSM 16634 Lactobacillus apodemi DSM 16634 = JCM 16172 PRJNA222257 SAMN02369391 type strain 38.6% 2,079,267 51 2,021 ☆☆☆☆ Contig 99.3% 0.48%
SRR1151156 Lactobacillus hamsteri DSM 5661 Lactobacillus hamsteri DSM 5661 = JCM 6256 PRJNA222257 SAMN02369398 type strain 35.1% 1,785,711 74 1,702 ☆☆☆☆ Contig 98.39% 0.16%
SRR1151160 Lactobacillus ingluviei DSM 15946 Lactobacillus ingluviei DSM 15946 PRJNA222257 SAMN02369402 type strain 49.9% 2,138,904 78 2,088 ☆☆☆☆ Scaffold 98.23% 0.54%
SRR1151163 Lactobacillus kalixensis DSM 16043 Lactobacillus kalixensis DSM 16043 PRJNA222257 SAMN02369405 type strain 36.1% 2,073,352 98 1,935 ☆☆☆☆ Contig 99.03% 0.81%
SRR1151168 Lactobacillus parabuchneri DSM 5707 Lactobacillus parabuchneri DSM 5707 = NBRC 107865 PRJNA222257 SAMN02369410 type strain 43.4% 2,568,303 45 2,377 ☆☆☆☆ Contig 98.71% 0.81%
SRR1151170 Lactobacillus reuteri DSM 20016 Lactobacillus reuteri DSM 20016 PRJNA222257 SAMN02369412 type strain 38.7% 1,931,341 95 1,911 ☆☆☆☆ Scaffold 98.71% 0.81%
SRR1151172 Lactobacillus salivarius DSM 20555 Lactobacillus salivarius DSM 20555 = ATCC 11741 PRJNA222257 SAMN02369414 type strain 32.6% 1,922,632 41 1,848 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151175 Lactobacillus vaginalis DSM 5837 Lactobacillus vaginalis DSM 5837 = ATCC 49540 PRJNA222257 SAMN02369417 type strain 40.5% 1,781,526 81 1,733 ☆☆☆☆ Scaffold 99.35% 1.13%
SRR1151181 Lactobacillus aviarius subsp. araffinosus DSM 20653 Lactobacillus aviarius subsp. araffinosus DSM 20653 PRJNA222257 SAMN02369423 type strain 38.1% 1,472,259 30 1,412 ☆☆☆☆ Scaffold 98.79% 0.59%
SRR1151186 Lactobacillus fuchuensis DSM 14340 Lactobacillus fuchuensis DSM 14340 = JCM 11249 PRJNA222257 SAMN02369428 type strain 41.8% 2,117,060 72 2,017 ☆☆☆☆ Contig 97.94% 2.1%
SRR1151190 Lactobacillus fructivorans DSM 20203 Lactobacillus fructivorans KCTC 3543 = DSM 20203 PRJNA222257 SAMN02369432 type strain 38.9% 1,372,674 15 1,336 ☆☆☆☆ Contig 98.06% 0.43%
SRR1151194 Lactobacillus acetotolerans DSM 20749 Lactobacillus acetotolerans DSM 20749 = JCM 3825 PRJNA222257 SAMN02369436 type strain 36.3% 1,580,786 111 1,526 ☆☆☆☆ Scaffold 98.71% 0.7%
SRR1151198 Lactobacillus capillatus DSM 19910 Lactobacillus capillatus DSM 19910 PRJNA222257 SAMN02369440 type strain 37.6% 2,230,716 53 2,109 ☆☆☆☆ Contig 99.03% 1.34%
SRR1151200 Lactobacillus composti DSM 18527 Lactobacillus composti DSM 18527 = JCM 14202 PRJNA222257 SAMN02369442 type strain 44.0% 3,463,695 66 3,306 ☆☆☆☆ Scaffold 99.35% 3.28%
SRR1151201 Lactobacillus dextrinicus DSM 20335 Lactobacillus dextrinicus DSM 20335 PRJNA222257 SAMN02369443 type strain 38.0% 1,807,580 22 1,725 ☆☆☆☆ Contig 98.47% 1.66%
SRR1151203 Lactobacillus fabifermentans DSM 21115 Lactobacillus fabifermentans DSM 21115 PRJNA222257 SAMN02369445 type strain 45.0% 3,274,808 177 3,111 ☆☆☆☆ Scaffold 99.03% 1.21%
SRR1151206 Lactobacillus futsaii JCM 17355 Lactobacillus futsaii JCM 17355 PRJNA222257 SAMN02369448 type strain 35.6% 2,504,500 139 2,463 ☆☆☆☆ Contig 99.14% 2.1%
SRR1151210 Lactobacillus hordei DSM 19519 Lactobacillus hordei DSM 19519 PRJNA222257 SAMN02369452 type strain 34.8% 2,297,355 122 2,242 ☆☆☆☆ Contig 98.39% 0.24%
SRR1151211 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 PRJNA222257 SAMN02369453 type strain 37.3% 2,258,515 112 2,316 ☆☆☆☆ Scaffold 98.87% 0.56%
SRR1151218 Lactobacillus mali DSM 20444 Lactobacillus mali KCTC 3596 = DSM 20444 PRJNA222257 SAMN02369460 type strain 36.1% 2,611,318 117 2,559 ☆☆☆☆ Scaffold 98.39% 1.42%
SRR1151225 Lactobacillus parabrevis ATCC 53295 Lactobacillus parabrevis ATCC 53295 PRJNA222257 SAMN02369467 type strain 49.0% 2,625,389 116 2,379 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1151242 Lactobacillus pentosus DSM 20314 Lactobacillus pentosus DSM 20314 PRJNA222257 SAMN02369484 type strain 46.3% 3,642,579 53 3,285 ☆☆☆☆ Scaffold 99.35% 2.0%
SRR1151261 Lactobacillus kunkeei DSM 12361 Lactobacillus kunkeei DSM 12361 = ATCC 700308 PRJNA222257 SAMN02369503 type strain 36.4% 1,514,488 20 1,353 ☆☆☆☆ Contig 97.9% 0.81%
SRR1552590 Lactobacillus plantarum subsp. plantarum ATCC 14917 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA247446 SAMN02777137 type strain 44.5% 3,221,177 20 3,025 ☆☆☆☆ Scaffold 99.03% 1.53%
SRR1552613 Lactobacillus plantarum ATCC 8014 Lactobacillus plantarum PRJNA247443 SAMN02777132 44.5% 3,236,604 41 3,032 ☆☆☆☆ Contig 99.35% 1.53%
SRR1552616 Lactobacillus plantarum ATCC 8014 Lactobacillus plantarum PRJNA247440 SAMN02777135 44.5% 3,237,179 44 3,034 ☆☆☆☆ Scaffold 99.35% 1.53%
SRR1554430 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999431 46.8% 2,810,085 61 2,621 ☆☆☆☆ Contig 99.35% 0.16%
SRR1554448 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999432 46.7% 2,821,156 57 2,637 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1561410 Pediococcus acidilactici AS1.2696 Pediococcus acidilactici PRJNA222257 SAMN02797809 42.1% 1,932,017 12 1,814 ☆☆☆☆ Scaffold 99.76% 0.93%
SRR1562046 Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 PRJNA222257 SAMN02797789 type strain 50.2% 1,734,106 563 1,627 ☆☆☆☆ Contig 99.08% 2.35%
SRR1655525 Lactobacillus paracasei 1316.rep1_LPAR Lactobacillus paracasei PRJNA267549 SAMN03197293 46.4% 2,742,529 227 2,608 ☆☆☆☆ Scaffold 99.35% 0.48%
SRR1656210 Lactobacillus rhamnosus 769_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197978 46.6% 2,978,210 101 2,770 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1656220 Lactobacillus salivarius 778_LSAL Lactobacillus salivarius PRJNA267549 SAMN03197988 32.7% 1,925,156 47 1,863 ☆☆☆☆ Scaffold 98.87% 0.48%
SRR1656309 Lactobacillus rhamnosus 870_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198077 46.6% 2,992,211 211 2,774 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR2095366 Lactobacillus crispatus unkown Lactobacillus crispatus PRJNA272101 SAMN03854351 36.5% 2,394,312 248 2,448 ☆☆☆☆ Scaffold 99.03% 1.0%
SRR447210 Lactobacillus gasseri EX336960VC10 Lactobacillus gasseri EX336960VC10 PRJNA50133 SAMN00829390 35.0% 1,882,519 211 1,782 ☆☆☆☆ Scaffold 96.88% 0.16%
SRR447236 Lactobacillus crispatus EX849587VC02 Lactobacillus crispatus EX849587VC02 PRJNA50053 SAMN00829399 36.8% 2,054,498 270 2,086 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR447239 Lactobacillus crispatus EX849587VC04 Lactobacillus crispatus EX849587VC04 PRJNA50057 SAMN00829123 36.9% 2,014,883 305 2,022 ☆☆☆☆ Scaffold 98.39% 0.16%
SRR515126 Lactobacillus crispatus FB049-03 Lactobacillus crispatus FB049-03 PRJNA52107 SAMN01057066 36.8% 2,200,479 238 2,252 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR203978 Lactobacillus paracasei B085_A Lactobacillus casei PRJEB3060 SAMEA1571079 46.3% 3,003,194 78 2,808 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR900637 Lactobacillus fermentum G220_5_26 Lactobacillus fermentum PRJEB3060 SAMEA3206617 52.3% 1,872,229 92 1,832 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR485020 Lactobacillus crispatus G216_1_2 Lactobacillus crispatus PRJEB3060 SAMEA1920319 36.8% 2,151,192 108 2,127 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151257 Lactobacillus amylolyticus DSM 11664 Lactobacillus amylolyticus DSM 11664 PRJNA222257 SAMN02369499 type strain 38.3% 1,539,298 58 1,574 ☆☆☆☆ Contig 99.03% 0.81%
ERR433464 Lactobacillus cacaonum DSM 21116 Lactobacillus cacaonum PRJEB3060 SAMEA2203397 type strain 33.8% 1,915,795 18 1,823 ☆☆☆☆ Contig 98.71% 0.16%
ERR485098 Lactobacillus plantarum G211_1_2 Lactobacillus plantarum PRJEB3060 SAMEA1920396 44.3% 3,451,941 97 3,245 ☆☆☆☆ Scaffold 99.19% 1.53%
ERR570287 Lactobacillus paracasei G283_5_2 Lactobacillus sp. PRJEB3060 SAMEA2437779 46.1% 3,037,193 161 2,875 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570218 Lactobacillus paracasei G260_5_32 Lactobacillus sp. PRJEB3060 SAMEA2437710 46.3% 3,039,758 112 2,878 ☆☆☆☆ Scaffold 98.71% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
SRR1151258 Lactobacillus amylophilus DSM 20533 Lactobacillus amylophilus DSM 20533 = JCM 1125 PRJNA222257 SAMN02369500 type strain 43.7% 1,546,306 21 1,550 ☆☆☆☆ Scaffold 98.06% 2.18%
ERR387474 Lactobacillus equigenerosi DSM 18793 Lactobacillus equigenerosi PRJEB3060 SAMEA2173680 type strain 42.6% 1,592,195 47 1,540 ☆☆☆☆ Scaffold 97.18% 0.4%
ERR387510 Lactobacillus intestinalis DSM 6629 Lactobacillus intestinalis PRJEB3060 SAMEA2173716 type strain 35.3% 1,993,045 31 1,838 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR386052 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276812 34.6% 1,970,839 23 1,856 ☆☆☆☆ Contig 99.03% 0.16%
ERR570186 Lactobacillus rhamnosus G255_5_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437678 46.3% 3,627,197 776 3,296 ☆☆☆ Scaffold 99.78% 6.95%
ERR386040 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276800 34.6% 2,004,416 33 1,931 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR386048 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276808 34.6% 1,969,167 46 1,852 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1151169 Lactobacillus pasteurii DSM 23907 Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 PRJNA222257 SAMN02369411 type strain 38.5% 1,753,652 23 1,684 ☆☆☆☆ Contig 98.23% 0.16%
ERR387515 Lactobacillus oeni DSM 19972 Lactobacillus oeni PRJEB3060 SAMEA2173721 type strain 37.3% 2,108,960 39 1,976 ☆☆☆☆ Scaffold 99.35% 0.81%
ERR900642 Lactobacillus gasseri G220_6_2 Lactobacillus gasseri PRJEB3060 SAMEA3206622 34.7% 2,104,192 33 2,053 ☆☆☆☆ Contig 99.35% 0.16%
SRR1151196 Lactobacillus buchneri DSM 20057 Lactobacillus buchneri DSM 20057 PRJNA222257 SAMN02369438 type strain 44.4% 2,451,635 89 2,345 ☆☆☆☆ Contig 99.03% 0.16%
ERR570133 Lactobacillus rhamnosus G231_1_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437625 46.6% 2,910,163 37 2,713 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1562044 Lactobacillus selangorensis DSM 13344 Lactobacillus selangorensis PRJNA222257 SAMN02797771 type strain 46.4% 2,084,905 29 2,065 ☆☆☆☆ Contig 98.71% 0.98%
SRR1554450 Lactobacillus rhamnosus GG Lactobacillus rhamnosus PRJNA258500 SAMN02999433 46.7% 2,826,474 78 2,638 ☆☆☆☆ Contig 99.35% 0.16%
ERR386038 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276798 34.6% 1,993,406 22 1,877 ☆☆☆☆ Contig 99.03% 0.16%
SRR1552612 Lactobacillus plantarum subsp. plantarum ATCC 14917 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA247444 SAMN02777139 type strain 44.5% 3,223,842 24 3,023 ☆☆☆☆ Scaffold 99.03% 1.53%
ERR298640 Lactobacillus fermentum G211_2_35 Lactobacillus fermentum PRJEB3060 SAMEA1920333 52.0% 1,889,148 147 1,827 ☆☆☆☆ Scaffold 98.79% 0.29%
SRR1151250 Lactobacillus panis DSM 6035 Lactobacillus panis DSM 6035 PRJNA222257 SAMN02369492 type strain 48.1% 1,986,287 133 1,887 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570139 Lactobacillus rhamnosus G231_4_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437631 46.6% 2,923,119 33 2,721 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1151228 Lactobacillus plantarum subsp. argentoratensis DSM 16365 Lactobacillus plantarum subsp. argentoratensis DSM 16365 PRJNA222257 SAMN02369470 type strain 45.0% 3,173,311 155 2,936 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR386027 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276787 34.6% 1,971,456 33 1,857 ☆☆☆☆ Contig 99.03% 0.16%
ERR298689 Lactobacillus gasseri G216_5_3 Lactobacillus gasseri PRJEB3060 SAMEA1920385 35.1% 1,858,561 25 1,770 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570134 Lactobacillus fermentum G231_1_12 Lactobacillus fermentum PRJEB3060 SAMEA2437626 52.2% 1,923,950 97 1,885 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR900639 Lactobacillus gasseri G287_2_14 Lactobacillus gasseri PRJEB3060 SAMEA3206619 35.1% 1,921,848 19 1,866 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR485082 Lactobacillus gasseri G210_1_41 Lactobacillus gasseri PRJEB3060 SAMEA1920379 34.7% 1,867,020 31 1,819 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR433495 Lactobacillus satsumensis DSM 16230 Lactobacillus satsumensis PRJEB3060 SAMEA2203429 type strain 39.9% 2,634,920 46 2,441 ☆☆☆☆ Scaffold 99.35% 0.7%
ERR433479 Lactobacillus ozensis DSM 23829 Lactobacillus ozensis PRJEB3060 SAMEA2203413 type strain 31.9% 1,476,372 28 1,439 ☆☆☆☆ Scaffold 97.37% 1.02%
SRR1552611 Lactobacillus plantarum subsp. plantarum ATCC 14917 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA247445 SAMN02777138 type strain 44.5% 3,223,643 24 3,025 ☆☆☆☆ Scaffold 99.03% 1.53%
ERR485044 Lactobacillus fermentum G216_2_33 Lactobacillus fermentum PRJEB3060 SAMEA1920343 51.5% 2,087,514 148 2,069 ☆☆☆☆ Scaffold 98.79% 0.16%
SRR1151260 Lactobacillus hilgardii DSM 20176 Lactobacillus hilgardii DSM 20176 = ATCC 8290 PRJNA222257 SAMN02369502 type strain 39.6% 2,605,214 111 2,538 ☆☆☆☆ Contig 99.35% 1.21%
ERR485059 Lactobacillus rhamnosus G215_1_3 Lactobacillus rhamnosus PRJEB3060 SAMEA1920358 46.5% 2,957,304 187 2,808 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570167 Lactobacillus fermentum G242_4_35 Lactobacillus fermentum PRJEB3060 SAMEA2437659 51.5% 2,042,244 149 2,053 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570122 Lactobacillus gasseri G210_6_1 Lactobacillus gasseri PRJEB3060 SAMEA2437614 34.7% 1,899,719 37 1,853 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387502 Lactobacillus ghanensis DSM 18630 Lactobacillus ghanensis PRJEB3060 SAMEA2173708 type strain 37.1% 2,597,818 33 2,417 ☆☆☆☆ Scaffold 99.03% 2.74%
SRR1151249 Lactobacillus nantensis DSM 16982 Lactobacillus nantensis DSM 16982 PRJNA222257 SAMN02369491 type strain 36.2% 2,922,522 84 2,767 ☆☆☆☆ Scaffold 99.14% 2.1%
ERR298690 Lactobacillus vaginalis G224_2_31 Lactobacillus vaginalis PRJEB3060 SAMEA1920382 40.1% 1,911,861 46 1,868 ☆☆☆☆ Contig 99.35% 0.81%
ERR570187 Lactobacillus fermentum G255_6_1 Lactobacillus fermentum PRJEB3060 SAMEA2437679 51.6% 2,107,620 130 2,093 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR570193 Lactobacillus gasseri G256_6_33 Lactobacillus gasseri PRJEB3060 SAMEA2437685 34.8% 2,126,793 21 2,016 ☆☆☆☆ Contig 99.35% 0.16%
ERR1045805 Lactobacillus iners UMB0033 Lactobacillus iners PRJEB8104 SAMEA3319400 32.5% 1,398,829 41 1,298 ☆☆☆☆ Scaffold 99.03% 0.18%
SRR1151191 Lactobacillus paracasei subsp. paracasei DSM 5622 Lactobacillus paracasei subsp. paracasei DSM 5622 PRJNA222257 SAMN02369433 type strain 46.5% 2,885,839 141 2,804 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR570189 Lactobacillus fermentum G256_2_5 Lactobacillus fermentum PRJEB3060 SAMEA2437681 52.2% 1,932,601 108 1,906 ☆☆☆☆ Scaffold 98.79% 0.48%
ERR570196 Lactobacillus paracasei G257_1_31 Lactobacillus sp. PRJEB3060 SAMEA2437688 46.2% 2,944,646 34 2,809 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.4% against L. paracasei subsp. paracasei)
ERR387553 Lactobacillus animalis DSM 20602 Lactobacillus animalis PRJEB3060 SAMEA2173759 type strain 41.1% 1,870,553 37 1,812 ☆☆☆☆ Scaffold 99.09% 0.16%
SRR1151124 Lactobacillus bifermentans DSM 20003 Lactobacillus bifermentans DSM 20003 PRJNA222257 SAMN02369366 type strain 44.3% 3,134,903 109 3,049 ☆☆☆☆ Contig 99.35% 3.87%
ERR433475 Lactobacillus kunkeei DSM 12361 Lactobacillus kunkeei PRJEB3060 SAMEA2203409 type strain 36.4% 1,514,274 19 1,355 ☆☆☆☆ Scaffold 97.9% 0.81%
ERR298666 Lactobacillus paracasei G218_4_1 Lactobacillus casei PRJEB3060 SAMEA1920360 46.3% 3,077,484 102 2,901 ☆☆☆☆ Scaffold 99.03% 0.48% The organism name was amended based on the ANI result.
ERR298648 Lactobacillus paracasei G211_4_15 Lactobacillus casei PRJEB3060 SAMEA1920341 46.2% 3,067,600 100 2,914 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
ERR570254 Lactobacillus oris G277_3_7 Lactobacillus oris PRJEB3060 SAMEA2437746 49.9% 2,115,129 88 2,023 ☆☆☆☆ Scaffold 99.35% 0.56%
ERR433467 Lactobacillus concavus DSM 17758 Lactobacillus concavus PRJEB3060 SAMEA2203400 type strain 43.3% 1,881,437 87 1,747 ☆☆☆☆ Contig 99.35% 0.87%
ERR900645 Lactobacillus vaginalis G303_3_6 Lactobacillus vaginalis PRJEB3060 SAMEA3206625 40.5% 1,861,478 57 1,810 ☆☆☆☆ Contig 99.35% 0.81%
ERR387541 Lactobacillus siliginis DSM 22696 Lactobacillus siliginis PRJEB3060 SAMEA2173747 type strain 44.1% 2,041,760 51 1,980 ☆☆☆☆ Scaffold 99.35% 0.89%
ERR204031 Lactobacillus gasseri M191_16 Lactobacillus gasseri PRJEB3060 SAMEA1571037 34.7% 1,926,365 40 1,876 ☆☆☆☆ Contig 99.35% 0.16%
ERR386033 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276793 34.6% 2,007,455 46 1,898 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387532 Lactobacillus selangorensis ATCC BAA 66 Lactobacillus selangorensis PRJEB3060 SAMEA2173738 type strain 46.4% 2,081,509 19 2,064 ☆☆☆☆ Contig 98.71% 0.98%
ERR387527 Lactobacillus acetotolerans DSM 20749 Lactobacillus acetotolerans PRJEB3060 SAMEA2173733 type strain 36.2% 1,571,585 107 1,518 ☆☆☆☆ Scaffold 98.71% 0.7%
ERR387545 Lactobacillus sunkii DSM 19904 Lactobacillus sunkii PRJEB3060 SAMEA2173751 type strain 42.1% 2,708,166 85 2,561 ☆☆☆☆ Scaffold 99.03% 0.81%
ERR570183 Lactobacillus plantarum G254_5_13 Lactobacillus plantarum PRJEB3060 SAMEA2437675 44.4% 3,280,242 58 3,072 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570269 Lactobacillus mucosae G278_5_1 Lactobacillus sp. PRJEB3060 SAMEA2437761 46.6% 2,162,027 30 2,022 ☆☆☆☆ Contig 99.03% 0.16% The organism name was inferred from ANI result. (96.2% against L. mucosae)
ERR298688 Lactobacillus fermentum G215_2_9 Lactobacillus fermentum PRJEB3060 SAMEA1920381 51.8% 1,994,894 142 1,958 ☆☆☆☆ Contig 98.79% 0.29%
ERR570265 Lactobacillus gasseri G278_2_12 Lactobacillus gasseri PRJEB3060 SAMEA2437757 35.1% 1,897,173 27 1,829 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR203994 Lactobacillus acidophilus ATCC 4356 Lactobacillus acidophilus PRJEB3060 SAMEA1571067 type strain 34.6% 1,950,435 24 1,868 ☆☆☆☆ Contig 99.03% 0.22%
ERR298696 Lactobacillus rhamnosus G215_4_2 Lactobacillus rhamnosus PRJEB3060 SAMEA1920389 46.7% 2,765,611 58 2,585 ☆☆☆☆ Contig 99.35% 0.16%
ERR570242 Lactobacillus paracasei G273_4_20 Lactobacillus sp. PRJEB3060 SAMEA2437734 46.2% 3,039,156 74 2,920 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.3% against L. paracasei subsp. paracasei)
SRR1151158 Lactobacillus hominis DSM 23910 Lactobacillus hominis DSM 23910 = CRBIP 24.179 PRJNA222257 SAMN02369400 type strain 35.2% 1,930,068 28 1,882 ☆☆☆☆ Contig 96.65% 0.16%
SRR1151155 Lactobacillus gigeriorum DSM 23908 Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 PRJNA222257 SAMN02369397 type strain 37.0% 1,906,781 81 1,870 ☆☆☆☆ Scaffold 98.39% 0.16%
ERR570273 Lactobacillus gasseri G279_2_10 Lactobacillus gasseri PRJEB3060 SAMEA2437765 34.7% 1,860,365 19 1,833 ☆☆☆☆ Contig 99.35% 0.16%
ERR386049 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276809 34.6% 1,965,524 45 1,851 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387521 Lactobacillus paralimentarius DSM 13238 Lactobacillus paralimentarius PRJEB3060 SAMEA2173727 type strain 35.1% 2,531,535 154 2,445 ☆☆☆☆ Contig 99.14% 2.34%
SRR1151219 Lactobacillus manihotivorans DSM 13343 Lactobacillus manihotivorans DSM 13343 = JCM 12514 PRJNA222257 SAMN02369461 type strain 47.7% 3,117,675 310 3,037 ☆☆☆☆ Scaffold 99.19% 1.56%
ERR387469 Lactobacillus camelliae DSM 22697 Lactobacillus camelliae PRJEB3060 SAMEA2173675 type strain 55.4% 2,553,708 93 2,403 ☆☆☆☆ Scaffold 99.35% 1.32%
SRR1151237 Lactobacillus thailandensis DSM 22698 Lactobacillus thailandensis DSM 22698 = JCM 13996 PRJNA222257 SAMN02369479 type strain 53.5% 2,064,913 22 1,893 ☆☆☆☆ Contig 98.06% 1.77%
ERR485076 Lactobacillus fermentum G216_4_12 Lactobacillus fermentum PRJEB3060 SAMEA1920374 51.6% 2,048,408 147 2,008 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570169 Lactobacillus plantarum G242_5_4 Lactobacillus sp. PRJEB3060 SAMEA2437661 44.5% 3,169,589 137 3,031 ☆☆☆☆ Scaffold 99.35% 2.18% The organism name was inferred from ANI result. (99.0% against L. plantarum subsp. plantarum)
SRR1656144 Lactobacillus rhamnosus 708_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197912 46.5% 2,924,943 149 2,748 ☆☆☆☆ Scaffold 99.35% 0.48%
SRR1656227 Lactobacillus rhamnosus 784_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197995 46.5% 2,942,760 83 2,758 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1656395 Lactobacillus rhamnosus 943_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198163 46.6% 3,006,344 171 2,800 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1752126 Lactobacillus kunkeei Fhon2 Lactobacillus kunkeei PRJNA270967 SAMN03275711 36.2% 1,549,108 55 1,417 ☆☆☆☆ Scaffold 97.9% 0.48%
SRR447204 Lactobacillus gasseri EX336960VC01 Lactobacillus gasseri EX336960VC01 PRJNA50115 SAMN00829387 34.9% 1,901,575 89 1,863 ☆☆☆☆ Scaffold 98.06% 0.16%
SRR447237 Lactobacillus jensenii EX849587VC03 Lactobacillus jensenii EX849587VC03 PRJNA50055 SAMN00829400 34.3% 1,528,280 95 1,459 ☆☆☆☆ Scaffold 98.71% 0.24%
SRR891939 Lactobacillus parabrevis RODS-DW Lactobacillus parabrevis ATCC 53295 SRP024607 SAMN02194396 49.0% 2,641,758 108 2,396 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387495 Lactobacillus futsaii JCM 17355 Lactobacillus futsaii PRJEB3060 SAMEA2173701 type strain 35.6% 2,490,561 136 2,449 ☆☆☆☆ Scaffold 99.14% 2.1%
ERR570249 Lactobacillus rhamnosus G277_1_2 Lactobacillus rhamnosus PRJEB3060 SAMEA2437741 46.5% 3,005,967 59 2,877 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570190 Lactobacillus vaginalis G256_3_13 Lactobacillus vaginalis PRJEB3060 SAMEA2437682 40.1% 2,097,822 93 2,063 ☆☆☆☆ Scaffold 99.14% 0.81%
ERR570126 Lactobacillus rhamnosus G220_5_13 Lactobacillus rhamnosus PRJEB3060 SAMEA2437618 46.7% 2,830,355 78 2,652 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1151184 Lactobacillus alimentarius DSM 20249 Lactobacillus alimentarius DSM 20249 PRJNA222257 SAMN02369426 type strain 35.4% 2,333,663 38 2,231 ☆☆☆☆ Scaffold 99.14% 1.45%
ERR570204 Lactobacillus fermentum G257_5_2 Lactobacillus fermentum PRJEB3060 SAMEA2437696 52.3% 1,890,781 92 1,869 ☆☆☆☆ Scaffold 98.79% 0.56%
ERR570199 Lactobacillus fermentum G257_2_9 Lactobacillus fermentum PRJEB3060 SAMEA2437691 52.3% 1,895,656 95 1,872 ☆☆☆☆ Scaffold 98.79% 0.56%
SRR1151142 Lactobacillus ruminis DSM 20403 Lactobacillus ruminis DSM 20403 = NBRC 102161 PRJNA222257 SAMN02369384 type strain 43.4% 2,022,509 93 1,901 ☆☆☆☆ Contig 98.71% 0.48%
SRR1151174 Lactobacillus ultunensis DSM 16047 Lactobacillus ultunensis DSM 16047 PRJNA222257 SAMN02369416 type strain 36.0% 2,169,096 84 2,115 ☆☆☆☆ Contig 98.39% 0.81%
ERR570174 Lactobacillus fermentum G246_3_21 Lactobacillus fermentum PRJEB3060 SAMEA2437666 52.3% 1,913,960 119 1,855 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570177 Lactobacillus plantarum G254_1_3 Lactobacillus plantarum PRJEB3060 SAMEA2437669 44.4% 3,280,645 57 3,073 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570176 Lactobacillus rhamnosus G254_1_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437668 46.6% 2,963,394 18 2,766 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570284 Lactobacillus plantarum G283_2_21 Lactobacillus plantarum PRJEB3060 SAMEA2437776 44.4% 3,285,048 32 3,120 ☆☆☆☆ Scaffold 98.39% 1.53%
ERR900638 Lactobacillus fermentum G220_3_1 Lactobacillus fermentum PRJEB3060 SAMEA3206618 51.6% 2,050,611 139 2,004 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR1045847 Lactobacillus crispatus UMB0803 Lactobacillus crispatus PRJEB8104 SAMEA3319366 37.0% 1,948,194 197 1,952 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387530 Lactobacillus aviarius subsp. aviarius DSM 20655 Lactobacillus aviarius subsp. aviarius PRJEB3060 SAMEA2173736 type strain 40.1% 1,674,521 23 1,585 ☆☆☆☆ Contig 99.11% 1.56%
ERR570219 Lactobacillus gasseri G263_3_1 Lactobacillus gasseri PRJEB3060 SAMEA2437711 35.0% 1,876,976 13 1,818 ☆☆☆☆ Scaffold 99.19% 0.16%
ERR570140 Lactobacillus fermentum G231_4_12 Lactobacillus fermentum PRJEB3060 SAMEA2437632 52.1% 1,942,491 98 1,901 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR298673 Lactobacillus rhamnosus G216_4_6 Lactobacillus rhamnosus PRJEB3060 SAMEA1920365 46.7% 3,050,954 58 2,875 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR485030 Lactobacillus plantarum G226_5_1 Lactobacillus plantarum PRJEB3060 SAMEA1920329 44.2% 3,487,612 140 3,281 ☆☆☆☆ Scaffold 99.19% 2.18%
ERR570138 Lactobacillus fermentum G231_2_7 Lactobacillus fermentum PRJEB3060 SAMEA2437630 52.2% 1,926,268 100 1,890 ☆☆☆☆ Scaffold 98.79% 0.24%
ERR204033 Lactobacillus paracasei M191_23 Lactobacillus paracasei PRJEB3060 SAMEA1571034 46.2% 3,108,682 113 2,991 ☆☆☆☆ Scaffold 99.35% 0.48%
SRR064779 Lactobacillus crispatus EX849587VC01 Lactobacillus crispatus EX849587VC01 PRJNA50051 SAMN00109860 36.8% 2,059,774 278 2,082 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1561413 Pediococcus claussenii DSM 14800 Pediococcus claussenii PRJNA222257 SAMN02797810 type strain 36.8% 1,890,471 37 1,819 ☆☆☆☆ Scaffold 99.71% 0.36%
ERR570257 Lactobacillus gasseri G277_5_19 Lactobacillus gasseri PRJEB3060 SAMEA2437749 34.6% 2,042,944 16 1,966 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR105102 Lactobacillus reuteri intest010 Lactobacillus reuteri PRJEB2824 SAMEA1094746 38.7% 1,938,744 92 1,923 ☆☆☆☆ Scaffold 98.71% 0.81%
ERR570205 Lactobacillus paracasei G257_5_8 Lactobacillus sp. PRJEB3060 SAMEA2437697 46.2% 2,944,752 38 2,808 ☆☆☆☆ Scaffold 99.35% 0.81% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR570178 Lactobacillus plantarum G254_2_1 Lactobacillus sp. PRJEB3060 SAMEA2437670 44.4% 3,280,476 58 3,068 ☆☆☆☆ Scaffold 99.35% 1.53% The organism name was inferred from ANI result. (99.1% against L. plantarum subsp. plantarum)
ERR387498 Lactobacillus agilis DSM 20509 Lactobacillus agilis PRJEB3060 SAMEA2173704 type strain 41.7% 2,047,633 63 2,015 ☆☆☆☆ Scaffold 98.23% 1.13%
ERR570267 Lactobacillus plantarum G278_4_2 Lactobacillus sp. PRJEB3060 SAMEA2437759 44.4% 3,316,285 59 3,130 ☆☆☆☆ Scaffold 99.35% 1.85% The organism name was inferred from ANI result. (99.2% against L. plantarum subsp. plantarum)
ERR386050 Lactobacillus acidophilus unkown Lactobacillus acidophilus PRJEB5094 SAMEA2276810 34.6% 1,971,499 26 1,855 ☆☆☆☆ Contig 99.03% 0.16%
ERR387477 Lactobacillus lindneri DSM 20690 Lactobacillus lindneri PRJEB3060 SAMEA2173683 type strain 34.1% 1,437,974 34 1,446 ☆☆☆☆ Scaffold 98.42% 0.87%
SRR1656431 Lactobacillus rhamnosus 979_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198199 46.6% 2,923,630 305 2,736 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR256997 Lactobacillus delbrueckii subsp. bulgaricus FLI006 Lactobacillus delbrueckii subsp. bulgaricus PRJEB3012 SAMEA1710717 49.9% 1,808,443 58 1,862 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR570118 Lactobacillus rhamnosus G210_4_9 Lactobacillus rhamnosus PRJEB3060 SAMEA2437610 46.6% 2,984,806 121 2,839 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570245 Lactobacillus fermentum G273_5_8 Lactobacillus fermentum PRJEB3060 SAMEA2437737 52.2% 1,898,078 135 1,850 ☆☆☆☆ Scaffold 98.79% 0.16%
SRR1151255 Lactobacillus spicheri DSM 15429 Lactobacillus spicheri DSM 15429 PRJNA222257 SAMN02369497 type strain 55.9% 2,744,686 35 2,453 ☆☆☆☆ Scaffold 98.99% 0.16%
ERR204043 Lactobacillus parabuchneri G205_BP_37 Lactobacillus parabuchneri PRJEB3060 SAMEA1571044 43.3% 2,666,963 144 2,441 ☆☆☆☆ Scaffold 98.63% 0.81%
SRR1151207 Lactobacillus ghanensis DSM 18630 Lactobacillus ghanensis DSM 18630 PRJNA222257 SAMN02369449 type strain 37.1% 2,602,751 31 2,416 ☆☆☆☆ Scaffold 99.03% 2.74%
ERR433468 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 Lactobacillus delbrueckii subsp. delbrueckii PRJEB3060 SAMEA2203401 type strain 50.1% 1,716,272 180 1,702 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR204038 Lactobacillus paracasei M191_31 Lactobacillus paracasei PRJEB3060 SAMEA1571036 46.1% 3,135,786 139 3,031 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR485099 Lactobacillus rhamnosus G216_1_1 Lactobacillus rhamnosus PRJEB3060 SAMEA1920399 46.7% 3,054,871 57 2,879 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR570262 Lactobacillus mucosae G278_1_2 Lactobacillus mucosae PRJEB3060 SAMEA2437754 46.6% 2,161,638 29 2,021 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR387531 Lactobacillus bifermentans DSM 20003 Lactobacillus sp. PRJEB3060 SAMEA2173737 44.3% 3,120,603 121 3,032 ☆☆☆☆ Scaffold 99.35% 3.87% The organism name was inferred from ANI result. (100% against L. bifermentans)
ERR485114 Lactobacillus koreensis JCM 16448 Lactobacillus sp. PRJEB3060 SAMEA2173700 49.2% 2,950,994 100 2,676 ☆☆☆☆ Scaffold 99.35% 0.89% The organism name was inferred from ANI result. (100% against L. koreensis)
ERR570143 Lactobacillus gasseri G234_3_3 Lactobacillus gasseri PRJEB3060 SAMEA2437635 34.6% 2,136,640 33 2,065 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387540 Lactobacillus sharpeae DSM 20505 Lactobacillus sharpeae PRJEB3060 SAMEA2173746 type strain 53.4% 2,438,466 58 2,344 ☆☆☆☆ Contig 97.98% 1.53%
ERR570191 Lactobacillus fermentum G256_3_26 Lactobacillus fermentum PRJEB3060 SAMEA2437683 51.8% 1,965,659 128 1,929 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570182 Lactobacillus rhamnosus G254_5_1 Lactobacillus rhamnosus PRJEB3060 SAMEA2437674 46.3% 3,563,407 1,114 3,165 ☆☆☆ Scaffold 98.6% 7.28%
ERR570213 Lactobacillus paracasei G260_4_3 Lactobacillus sp. PRJEB3060 SAMEA2437705 46.3% 3,040,603 113 2,879 ☆☆☆☆ Scaffold 98.71% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
ERR387508 Lactobacillus gallinarum DSM 10532 Lactobacillus gallinarum PRJEB3060 SAMEA2173714 type strain 36.5% 1,925,768 63 1,912 ☆☆☆☆ Scaffold 99.03% 0.16%
ERR1045859 Lactobacillus crispatus UMB0085 Lactobacillus crispatus PRJEB8104 SAMEA3319392 36.7% 2,134,295 153 2,139 ☆☆☆☆ Scaffold 99.03% 0.16%
SRR1561415 Pediococcus ethanolidurans DSM 22301 Pediococcus ethanolidurans PRJNA222257 SAMN02797818 type strain 37.2% 2,267,786 66 2,151 ☆☆☆ Scaffold 91.8% 8.66%
ERR438946 Lactobacillus aviarius subsp. araffinosus DSM 20653 Lactobacillus aviarius subsp. araffinosus PRJEB3060 SAMEA2203396 type strain 38.1% 1,470,053 26 1,410 ☆☆☆☆ Scaffold 98.79% 0.59%
ERR570212 Lactobacillus salivarius G260_4_27 Lactobacillus salivarius PRJEB3060 SAMEA2437704 32.8% 2,025,879 85 2,008 ☆☆☆☆ Scaffold 99.03% 0.48%
SRR1151220 Lactobacillus nasuensis JCM 17158 Lactobacillus nasuensis JCM 17158 PRJNA222257 SAMN02369462 type strain 57.0% 2,278,732 25 2,137 ☆☆☆☆ Scaffold 99.03% 0.46%
ERR387480 Lactobacillus diolivorans DSM 14421 Lactobacillus diolivorans PRJEB3060 SAMEA2173686 type strain 40.0% 3,202,031 93 2,962 ☆☆☆☆ Contig 98.71% 0.24%
ERR570129 Lactobacillus fermentum G222_2_11 Lactobacillus fermentum PRJEB3060 SAMEA2437621 52.1% 1,951,142 128 1,928 ☆☆☆☆ Scaffold 98.79% 0.48%
ERR433482 Lactobacillus paracasei subsp. tolerans LMG 9191 Lactobacillus paracasei subsp. tolerans PRJEB3060 SAMEA2203416 type strain 46.3% 2,453,622 355 2,455 ☆☆☆☆ Scaffold 99.35% 0.48%
ERR570149 Lactobacillus fermentum G238_2_11 Lactobacillus fermentum PRJEB3060 SAMEA2437641 51.7% 2,004,590 160 1,958 ☆☆☆☆ Scaffold 98.79% 0.16%
ERR570227 Lactobacillus gasseri G269_3_1 Lactobacillus gasseri PRJEB3060 SAMEA2437719 34.8% 1,968,038 16 1,860 ☆☆☆☆ Contig 99.35% 0.16%
ERR433489 Lactobacillus pobuzihii NBRC_103219 Lactobacillus pobuzihii PRJEB3060 SAMEA2203423 37.7% 2,332,959 56 2,125 ☆☆☆☆ Scaffold 98.39% 1.02%
ERR433462 Lactobacillus apodemi DSM 16634 Lactobacillus apodemi PRJEB3060 SAMEA2203395 type strain 38.6% 2,082,063 28 2,019 ☆☆☆☆ Scaffold 99.3% 0.48%
ERR570192 Lactobacillus fermentum G256_6_16 Lactobacillus fermentum PRJEB3060 SAMEA2437684 51.8% 1,964,660 129 1,928 ☆☆☆☆ Scaffold 98.79% 0.16%
SRR1151247 Lactobacillus mindensis DSM 14500 Lactobacillus mindensis DSM 14500 PRJNA222257 SAMN02369489 type strain 38.2% 2,333,273 92 2,210 ☆☆☆☆ Scaffold 99.14% 3.47%
SRR1151251 Lactobacillus paralimentarius DSM 13238 Lactobacillus paralimentarius DSM 13238 = JCM 10415 PRJNA222257 SAMN02369493 type strain 35.1% 2,533,817 148 2,454 ☆☆☆☆ Contig 99.14% 2.34%
ERR204035 Lactobacillus gasseri M252_19 Lactobacillus gasseri PRJEB3060 SAMEA1571093 34.6% 1,975,518 44 1,942 ☆☆☆☆ Contig 99.35% 0.16%
ERR387535 Lactobacillus xiangfangensis LMG 26013 Lactobacillus sp. PRJEB3060 SAMEA2173741 45.1% 2,977,943 88 2,754 ☆☆☆☆ Scaffold 99.03% 1.85% The organism name was inferred from ANI result. (100% against L. xiangfangensis)
ERR105094 Lactobacillus reuteri intest002 Lactobacillus reuteri PRJEB2824 SAMEA1094745 38.2% 2,184,486 126 2,109 ☆☆☆☆ Scaffold 99.35% 0.91%
ERR1045849 Lactobacillus crispatus UMB0911 Lactobacillus crispatus PRJEB8104 SAMEA3319373 36.6% 2,375,076 266 2,423 ☆☆☆☆ Scaffold 99.03% 0.56%
SRR1151229 Lactobacillus pobuzihii KCTC 13174 Lactobacillus pobuzihii E100301 = KCTC 13174 PRJNA222257 SAMN02369471 type strain 37.7% 2,332,525 57 2,124 ☆☆☆☆ Scaffold 98.39% 1.02%
ERR570206 Lactobacillus vaginalis G257_6_2 Lactobacillus vaginalis PRJEB3060 SAMEA2437698 40.1% 1,915,577 42 1,853 ☆☆☆☆ Contig 99.35% 0.81%
ERR570170 Lactobacillus paracasei G242_5_5 Lactobacillus sp. PRJEB3060 SAMEA2437662 46.2% 2,938,848 58 2,860 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was inferred from ANI result. (98.5% against L. paracasei subsp. paracasei)
SRR1552614 Lactobacillus plantarum ATCC 8014 Lactobacillus plantarum PRJNA247442 SAMN02777133 44.5% 3,235,939 45 3,027 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570230 Lactobacillus gasseri G271_3_1 Lactobacillus gasseri PRJEB3060 SAMEA2437722 34.8% 1,945,393 13 1,809 ☆☆☆☆ Scaffold 99.35% 0.16%
ERR387522 Lactobacillus plantarum subsp. argentoratensis DSM 16365 Lactobacillus plantarum subsp. argentoratensis PRJEB3060 SAMEA2173728 type strain 45.0% 3,172,036 148 2,939 ☆☆☆☆ Scaffold 99.35% 1.53%
ERR570158 Lactobacillus gasseri G241_2_5 Lactobacillus gasseri PRJEB3060 SAMEA2437650 34.6% 2,012,632 51 1,987 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1656441 Lactobacillus rhamnosus 988_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198209 46.6% 3,006,972 130 2,804 ☆☆☆☆ Scaffold 99.35% 0.16%
SRR1922837 Lactobacillus fermentum HMSC24D01 Lactobacillus sp. HMSC24D01 PRJNA269831 SAMN03436212 52.4% 1,920,929 120 1,869 ☆☆☆☆ Scaffold 98.15% 0.24% The organism name was inferred from ANI result. (99.4% against L. fermentum)
SRR447245 Lactobacillus crispatus EX849587VC08 Lactobacillus crispatus EX849587VC08 PRJNA50067 SAMN00829125 37.0% 1,959,012 344 1,908 ☆☆☆☆ Scaffold 97.69% 0.16%
SRR896348 Lactobacillus saerimneri DSM 16049 Lactobacillus saerimneri DSM 16049 PRJNA185633 SAMN02199237 type strain 42.6% 1,710,658 53 1,703 ☆☆☆☆ Contig 98.71% 0.16%
GCA_000011985.1 Lactobacillus acidophilus NCFM Lactobacillus acidophilus NCFM PRJNA82 SAMN02603047 34.7% 1,993,560 1 1,875 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_000014405.1 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 PRJNA403 SAMN02598530 49.7% 1,856,951 1 1,906 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000014465.1 Lactobacillus brevis ATCC 367 Lactobacillus brevis ATCC 367 PRJNA404 SAMN02598532 46.1% 2,340,228 3 2,281 ☆☆☆☆☆ Complete Genome 99.03% 0.24%
GCA_000026505.1 Lactobacillus rhamnosus GG (ATCC 53103) Lactobacillus rhamnosus GG PRJEA32195 SAMEA2272375 46.7% 3,010,111 1 2,817 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000149125.2 Lactobacillus iners LactinV 01V1-a Lactobacillus iners LactinV 01V1-a PRJNA52033 SAMN00115036 32.7% 1,294,173 92 1,512 ☆☆☆☆ Contig 95.54% 0.16%
GCA_000159495.1 Lactobacillus paracasei subsp. paracasei ATCC 25302 Lactobacillus paracasei subsp. paracasei ATCC 25302 PRJNA31513 SAMN00001470 type strain 46.5% 2,991,737 73 2,808 ☆☆☆☆ Scaffold 99.35% 0.81%
GCA_000160515.1 Lactobacillus crispatus JV-V01 Lactobacillus crispatus JV-V01 PRJNA30641 SAMN00002229 36.9% 2,221,719 86 2,093 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000161915.2 Lactobacillus crispatus MV-1A-US Lactobacillus crispatus MV-1A-US PRJNA37951 SAMN02463726 36.8% 2,252,504 7 2,280 ☆☆☆☆ Scaffold 99.03% 0.0%
GCA_000173255.2 Lactobacillus rhamnosus HN001 Lactobacillus rhamnosus HN001 PRJNA29219 SAMN02469790 46.7% 2,914,408 96 2,689 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000175035.1 Lactobacillus jensenii 269-3 Lactobacillus jensenii 269-3 PRJNA34097 SAMN00001905 34.4% 1,688,275 57 1,564 ☆☆☆☆ Contig 98.71% 0.24%
GCA_000191705.2 Lactobacillus iners UPII 60-B Lactobacillus iners UPII 60-B PRJNA60375 SAMN00138212 32.7% 1,323,615 31 1,269 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000204435.2 Lactobacillus iners SPIN 1401G Lactobacillus iners SPIN 1401G PRJNA52029 SAMN00115034 32.5% 1,281,027 52 1,219 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000211375.1 Lactobacillus buchneri NRRL B-30929 Lactobacillus buchneri NRRL B-30929 PRJNA29003 SAMN00713605 44.2% 2,588,309 4 2,504 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_000214785.1 Lactobacillus kefiranofaciens ZW3 Lactobacillus kefiranofaciens ZW3 PRJNA66525 SAMN02603965 37.4% 2,354,088 3 2,420 ☆☆☆☆☆ Complete Genome 98.87% 0.77%
GCA_000235785.2 Lactobacillus rhamnosus R0011 Lactobacillus rhamnosus R0011 PRJNA51799 SAMN02469944 46.7% 2,900,620 10 2,709 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000235865.1 Lactobacillus rhamnosus ATCC 21052 Lactobacillus rhamnosus ATCC 21052 PRJNA65127 SAMN02299451 46.7% 2,877,033 42 2,680 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_000247735.2 Lactobacillus plantarum subsp. plantarum NC8 Lactobacillus plantarum subsp. plantarum NC8 PRJNA67175 SAMN02470702 44.6% 3,207,224 10 3,000 ☆☆☆☆ Contig 99.03% 1.61%
GCA_000260635.1 Lactobacillus acidipiscis KCTC 13900 Lactobacillus acidipiscis KCTC 13900 PRJDA68091 SAMD00036563 39.1% 2,280,764 445 2,200 ☆☆☆☆ Contig 97.42% 2.74%
GCA_000284695.1 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 PRJNA67859 SAMN02436800 49.9% 1,767,897 69 1,787 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000309605.1 Lactobacillus paracasei 32G Lactobacillus casei 32G PRJNA68463 SAMN02472010 46.4% 3,011,496 42 3,112 ☆☆☆☆ Contig 98.93% 0.16% The organism name was amended based on the ANI result.
GCA_000309785.1 Lactobacillus paracasei Lpc-37 Lactobacillus casei Lpc-37 PRJNA68487 SAMN02472013 46.3% 3,075,253 150 2,919 ☆☆☆☆ Contig 98.39% 0.48% The organism name was amended based on the ANI result.
GCA_000311965.1 Lactobacillus rhamnosus LRHMDP3 Lactobacillus rhamnosus LRHMDP3 PRJNA169313 SAMN01757838 46.6% 2,911,934 47 2,747 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000349725.1 Lactobacillus pobuzihii E100301 Lactobacillus pobuzihii E100301 = KCTC 13174 PRJNA177370 SAMN02470552 type strain 37.7% 2,351,656 54 2,127 ☆☆☆☆ Scaffold 96.88% 1.02%
GCA_000364185.1 Lactobacillus intestinalis ASF360 Lactobacillus sp. ASF360 PRJNA176000 SAMN01731004 35.9% 2,012,717 28 1,742 ☆☆☆ Scaffold 93.99% 0.16% The organism name was inferred from ANI result. (96.6% against L. intestinalis)
GCA_000376145.1 Lactobacillus paracasei UW4 Lactobacillus casei UW4 PRJNA165565 SAMN02256476 46.4% 2,628,832 144 2,531 ☆☆☆☆ Contig 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000410415.1 Lactobacillus paracasei subsp. paracasei Lpp37 Lactobacillus paracasei subsp. paracasei Lpp37 PRJNA178438 SAMN02469718 46.3% 2,978,454 264 2,902 ☆☆☆☆ Contig 98.0% 1.13%
GCA_000410795.1 Lactobacillus plantarum IPLA88 Lactobacillus plantarum IPLA88 PRJNA198827 SAMN02470055 44.4% 3,254,055 208 3,090 ☆☆☆☆ Contig 99.35% 1.53%
GCA_000412205.1 Lactobacillus plantarum 16 Lactobacillus plantarum 16 PRJNA198762 SAMN02604115 44.3% 3,361,015 11 3,132 ☆☆☆☆☆ Complete Genome 99.35% 1.53%
GCA_000469745.1 Lactobacillus acidophilus DSM 9126 Lactobacillus acidophilus DSM 9126 PRJEB1839 SAMEA2272239 34.6% 1,991,758 27 1,871 ☆☆☆☆ Scaffold 98.39% 0.16%
GCA_000469765.1 Lactobacillus acidophilus CIRM-BIA 445 Lactobacillus acidophilus CIRM-BIA 445 PRJEB1531 SAMEA2272655 34.5% 2,002,008 22 1,885 ☆☆☆☆ Scaffold 98.95% 0.16%
GCA_000474615.1 Lactobacillus paracasei 5b Lactobacillus casei 5b PRJNA213287 SAMN02470054 46.3% 3,019,931 91 2,885 ☆☆☆☆ Contig 99.03% 0.59% The organism name was amended based on the ANI result.
GCA_000496435.1 Lactobacillus fermentum NB-22 Lactobacillus fermentum NB-22 PRJNA223167 SAMN02470787 51.8% 2,011,311 137 1,970 ☆☆☆☆ Scaffold 98.79% 0.24%
GCA_000498675.1 Lactobacillus johnsonii N6.2 Lactobacillus johnsonii N6.2 PRJNA222774 SAMN02641596 34.5% 1,887,251 1 1,744 ☆☆☆☆☆ Complete Genome 99.03% 0.25%
GCA_000615165.1 Lactobacillus acidophilus JCM 1132 Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 PRJDB636 SAMD00013701 type strain 34.6% 1,947,720 26 1,962 ☆☆☆☆ Contig 98.23% 0.22%
GCA_000722535.2 Lactobacillus reuteri TMW1.112 Lactobacillus reuteri PRJNA248653 SAMN02840984 38.4% 2,032,034 12 1,999 ☆☆☆☆ Contig 98.66% 0.81%
GCA_000740055.1 Lactobacillus oryzae SG293 Lactobacillus oryzae JCM 18671 PRJDB1101 SAMD00000345 type strain 42.8% 1,860,394 93 1,859 ☆☆☆☆ Contig 98.71% 0.24%
GCA_000755625.1 Lactobacillus sakei wikim 22 Lactobacillus sakei PRJNA260124 SAMN03024089 40.6% 2,185,902 155 2,304 ☆☆☆☆ Contig 97.65% 0.16%
GCA_000761135.1 Lactobacillus helsingborgensis wkB8 Lactobacillus sp. wkB8 PRJNA260941 SAMN03067541 36.7% 1,932,531 2 1,735 ☆☆☆☆☆ Complete Genome 98.06% 0.65% The organism name was inferred from ANI result. (96.9% against L. helsingborgensis)
GCA_000765465.1 Lactobacillus helveticus ATCC 10386 Lactobacillus helveticus PRJNA262972 SAMN03093187 36.8% 1,867,665 321 1,957 ☆☆☆☆ Contig 98.23% 0.16%
GCA_000766905.1 Lactobacillus mucosae CRL573 Lactobacillus mucosae PRJNA262170 SAMN03081593 46.6% 2,257,701 38 2,678 ☆☆☆☆ Contig 96.42% 0.32%
GCA_000784455.1 Lactobacillus brevis WK12 Lactobacillus brevis PRJDB3257 SAMD00021033 45.4% 2,601,795 109 2,609 ☆☆☆☆ Contig 98.39% 0.89%
GCA_000807975.1 Lactobacillus brevis BSO 464 Lactobacillus brevis BSO 464 PRJNA203088 SAMN03273225 45.4% 2,723,202 9 2,700 ☆☆☆☆☆ Chromosome 99.03% 0.16%
GCA_000814725.1 Lactobacillus brevis DmCS_003 Lactobacillus brevis PRJNA252105 SAMN02849429 45.4% 2,864,217 103 2,851 ☆☆☆☆ Contig 99.03% 0.27%
GCA_000833395.1 Lactobacillus brevis TMW 1.465 Lactobacillus brevis PRJNA264952 SAMN03144672 45.9% 2,540,645 33 2,471 ☆☆☆☆ Contig 96.43% 0.81%
GCA_000876205.1 Lactobacillus wasatchensis WDC04 Lactobacillus wasatchensis PRJNA203424 SAMN03351325 type strain 39.8% 1,904,253 105 1,807 ☆☆☆☆ Contig 99.35% 1.13%
GCA_000962875.1 Pediococcus damnosus LMG 28219 Pediococcus damnosus LMG 28219 PRJNA234374 SAMN02592738 38.2% 2,231,216 183 2,125 ☆☆☆ Contig 92.16% 8.76%
GCA_000970775.1 Lactobacillus melliventris Hma8 Lactobacillus melliventris PRJNA257139 SAMN03275746 type strain 35.8% 2,116,151 9 1,994 ☆☆☆☆ Scaffold 97.74% 0.97%
GCA_000970795.1 Lactobacillus mellifer Bin4 Lactobacillus mellifer PRJNA257185 SAMN03275731 type strain 39.3% 1,815,047 11 1,661 ☆☆☆☆ Scaffold 97.9% 0.81%
GCA_000980505.1 Lactobacillus amylovorus N54.MGS-719 Lactobacillus sp. N54.MGS-719 PRJNA277012 SAMN03450008 38.4% 1,821,790 151 1,783 ☆☆☆☆ Contig 98.69% 0.4% The organism name was inferred from ANI result. (97.1% against L. amylovorus)
GCA_001005805.1 Lactobacillus plantarum PS128 Lactobacillus plantarum PRJNA279324 SAMN03445817 44.4% 3,325,806 11 3,084 ☆☆☆☆ Scaffold 99.03% 1.96%
GCA_001027985.1 Lactobacillus panis DSM 6035 Lactobacillus panis DSM 6035 PRJNA284098 SAMN03658566 type strain 47.9% 2,082,789 219 1,938 ☆☆☆☆ Contig 99.35% 1.96%
GCA_001043995.1 Lactobacillus rhamnosus Lr073 Lactobacillus rhamnosus PRJNA253894 SAMN03196656 46.6% 2,814,449 735 2,624 ☆☆☆☆ Contig 97.33% 2.79%
GCA_001062695.1 Lactobacillus paracasei 1316.rep2_LPAR Lactobacillus paracasei PRJNA267549 SAMN03197294 46.4% 2,792,770 264 2,656 ☆☆☆☆ Contig 99.35% 2.42%
GCA_001067025.1 Lactobacillus rhamnosus 708_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197912 46.6% 2,960,739 166 2,769 ☆☆☆☆ Contig 99.35% 0.48%
GCA_001067215.1 Lactobacillus rhamnosus 769_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197978 46.7% 3,004,788 167 2,786 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001263315.1 Lactobacillus delbrueckii subsp. delbrueckii KACC 13439 Lactobacillus delbrueckii subsp. delbrueckii PRJNA289288 SAMN03852100 type strain 50.0% 1,766,190 147 1,769 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001267905.1 Lactobacillus plantarum L31-1 Lactobacillus plantarum PRJNA286052 SAMN03764446 44.5% 3,216,480 45 3,041 ☆☆☆☆ Scaffold 99.19% 1.53%
GCA_001270785.1 Lactobacillus johnsonii 16 Lactobacillus johnsonii 16 PRJNA67007 SAMN03995694 34.6% 1,787,772 156 1,698 ☆☆☆☆ Contig 98.71% 0.16%
GCA_001272315.1 Lactobacillus plantarum subsp. plantarum CGMCC 1.557 Lactobacillus plantarum subsp. plantarum PRJNA292463 SAMN03976562 44.4% 3,275,144 4 3,092 ☆☆☆☆☆ Chromosome 99.35% 1.53%
GCA_001296095.1 Lactobacillus plantarum ZS2058 Lactobacillus plantarum PRJNA291681 SAMN03952027 44.7% 3,198,337 1 2,953 ☆☆☆☆☆ Complete Genome 99.35% 1.53%
GCA_001308185.1 Lactobacillus kunkeei LMbe Lactobacillus kunkeei PRJNA270972 SAMN03277035 36.5% 1,478,744 18 1,326 ☆☆☆☆ Contig 97.9% 0.81%
GCA_001308285.1 Lactobacillus helveticus CAUH18 Lactobacillus helveticus PRJNA292623 SAMN03982146 36.8% 2,160,583 1 2,235 ☆☆☆☆☆ Complete Genome 98.68% 0.16%
GCA_001308305.1 Lactobacillus plantarum Nizo2877 Lactobacillus plantarum PRJNA297436 SAMN04123802 44.5% 3,231,771 2 3,014 ☆☆☆☆ Contig 99.03% 1.53%
GCA_000161895.2 Lactobacillus jensenii 27-2-CHN Lactobacillus jensenii 27-2-CHN PRJNA37953 SAMN02463727 34.1% 1,639,455 4 1,511 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001311135.1 Lactobacillus paracollinoides JCM 11969 Lactobacillus paracollinoides DSM 15502 = JCM 11969 PRJDB762 SAMD00000423 type strain 46.8% 3,510,481 170 4,076 ☆☆☆☆ Contig 96.53% 1.36%
GCA_001311335.1 Lactobacillus kefiranofaciens subsp. kefirgranum JCM 8572 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 PRJDB772 SAMD00000473 type strain 37.4% 2,065,566 104 2,913 ☆☆☆ Contig 92.94% 1.34%
GCA_001311725.1 Lactobacillus acetotolerans JCM 3825 Lactobacillus acetotolerans DSM 20749 = JCM 3825 PRJDB802 SAMD00000468 type strain 36.2% 1,577,546 104 2,604 ☆☆☆ Contig 85.35% 1.19%
GCA_001313185.1 Lactobacillus odoratitofui JCM 15043 Lactobacillus odoratitofui DSM 19909 = JCM 15043 PRJDB923 SAMD00016938 type strain 44.2% 2,744,707 23 3,711 ☆☆☆ Contig 91.48% 1.21%
GCA_001421115.1 Lactobacillus kunkeei LAce Lactobacillus kunkeei PRJNA270962 SAMN03275714 37.2% 1,525,855 8 1,368 ☆☆☆☆ Scaffold 97.58% 0.48%
GCA_000498955.2 Lactobacillus fabifermentans DSM 21115 Lactobacillus fabifermentans DSM 21115 PRJNA222257 SAMN02369445 type strain 45.0% 3,279,100 181 3,119 ☆☆☆☆ Scaffold 99.03% 1.21%
GCA_001433975.1 Lactobacillus johnsonii ATCC 33200 Lactobacillus johnsonii ATCC 33200 PRJNA222257 SAMN02369381 type strain 34.4% 1,773,599 37 1,768 ☆☆☆☆ Contig 99.25% 0.16%
GCA_001434055.1 Lactobacillus parabrevis ATCC 53295 Lactobacillus parabrevis ATCC 53295 PRJNA222257 SAMN02369467 type strain 49.0% 2,614,213 133 2,363 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001434225.1 Lactobacillus nagelii DSM 13675 Lactobacillus nagelii DSM 13675 PRJNA222257 SAMN02369505 type strain 36.7% 2,498,521 44 2,417 ☆☆☆☆ Scaffold 99.35% 2.16%
GCA_001434255.1 Lactobacillus diolivorans DSM 14421 Lactobacillus diolivorans DSM 14421 PRJNA222257 SAMN02369444 type strain 40.0% 3,261,379 109 3,011 ☆☆☆☆ Scaffold 98.71% 0.24%
GCA_001434405.1 Lactobacillus apodemi DSM 16634 Lactobacillus apodemi DSM 16634 = JCM 16172 PRJNA222257 SAMN02369391 type strain 38.6% 2,091,181 54 2,032 ☆☆☆☆ Scaffold 99.3% 0.48%
GCA_001434705.1 Lactobacillus nasuensis JCM 17158 Lactobacillus nasuensis JCM 17158 PRJNA222257 SAMN02369462 type strain 57.0% 2,280,237 35 2,140 ☆☆☆☆ Scaffold 99.03% 0.46%
GCA_001434835.1 Lactobacillus acidifarinae DSM 19394 Lactobacillus acidifarinae DSM 19394 PRJNA222257 SAMN02369485 type strain 51.6% 2,918,319 30 2,734 ☆☆☆☆ Scaffold 99.35% 0.81%
GCA_001435235.1 Lactobacillus ghanensis DSM 18630 Lactobacillus ghanensis DSM 18630 PRJNA222257 SAMN02369449 type strain 37.1% 2,605,329 33 2,413 ☆☆☆☆ Scaffold 99.03% 2.74%
GCA_001435245.1 Lactobacillus equigenerosi DSM 18793 Lactobacillus equigenerosi DSM 18793 = JCM 14505 PRJNA222257 SAMN02369380 type strain 42.7% 1,599,963 68 1,533 ☆☆☆☆ Scaffold 97.18% 0.4%
GCA_001435695.1 Lactobacillus psittaci DSM 15354 Lactobacillus psittaci DSM 15354 PRJNA222257 SAMN02369382 type strain 35.6% 1,541,412 50 1,343 ☆☆☆☆ Scaffold 98.06% 0.16%
GCA_001435735.1 Lactobacillus equi DSM 15833 Lactobacillus equi DSM 15833 = JCM 10991 PRJNA222257 SAMN02369395 type strain 39.0% 2,284,210 205 2,188 ☆☆☆☆ Scaffold 99.03% 1.64%
GCA_001435895.1 Lactobacillus parafarraginis DSM 18390 Lactobacillus parafarraginis DSM 18390 = JCM 14109 PRJNA222257 SAMN02369507 type strain 45.2% 3,081,674 254 2,921 ☆☆☆☆ Scaffold 98.71% 0.7%
GCA_001436275.1 Lactobacillus oeni DSM 19972 Lactobacillus oeni DSM 19972 PRJNA222257 SAMN02369506 type strain 37.3% 2,117,633 43 1,983 ☆☆☆☆ Scaffold 99.35% 0.81%
GCA_001436295.1 Lactobacillus vaccinostercus DSM 20634 Lactobacillus vaccinostercus DSM 20634 PRJNA222257 SAMN02369385 type strain 43.5% 2,559,201 72 2,443 ☆☆☆☆ Scaffold 99.35% 0.56%
GCA_001436605.1 Lactobacillus floricola DSM 23037 Lactobacillus floricola DSM 23037 = JCM 16512 PRJNA222257 SAMN02369446 type strain 34.5% 1,289,346 20 1,252 ☆☆☆☆ Scaffold 95.35% 1.45%
GCA_001436645.1 Lactobacillus florum DSM 22689 Lactobacillus florum DSM 22689 = JCM 16035 PRJNA222257 SAMN02369447 type strain 41.1% 1,348,606 50 1,302 ☆☆☆☆ Contig 97.77% 0.06%
GCA_001436695.1 Lactobacillus taiwanensis DSM 21401 Lactobacillus taiwanensis DSM 21401 PRJNA222257 SAMN02369478 type strain 33.9% 1,873,389 52 1,820 ☆☆☆☆ Scaffold 99.25% 0.16%
GCA_001436775.1 Lactobacillus acetotolerans DSM 20749 Lactobacillus acetotolerans DSM 20749 = JCM 3825 PRJNA222257 SAMN02369436 type strain 36.3% 1,585,076 123 1,532 ☆☆☆☆ Scaffold 98.71% 0.7%
GCA_001436905.1 Pediococcus claussenii DSM 14800 Pediococcus claussenii PRJNA222257 SAMN02797810 type strain 36.7% 1,879,349 44 1,799 ☆☆☆☆ Scaffold 99.71% 0.36%
GCA_001437235.1 Lactobacillus ingluviei DSM 14792 Lactobacillus ingluviei PRJNA222257 SAMN02797772 50.0% 2,126,433 111 1,994 ☆☆☆☆ Scaffold 98.23% 0.4%
GCA_001437535.1 Lactobacillus helveticus LMG 22464 Lactobacillus helveticus PRJNA222257 SAMN02797793 36.5% 1,771,777 267 1,825 ☆☆☆☆ Scaffold 97.26% 0.16%
GCA_000159215.1 Lactobacillus fermentum ATCC 14931 Lactobacillus fermentum ATCC 14931 PRJNA31485 SAMN00001473 type strain 52.8% 1,867,005 74 1,751 ☆☆☆☆ Scaffold 98.15% 0.48%
GCA_000014425.1 Lactobacillus gasseri ATCC 33323 Lactobacillus gasseri ATCC 33323 = JCM 1131 PRJNA84 SAMN02598542 type strain 35.3% 1,894,360 1 1,808 ☆☆☆☆☆ Complete Genome 98.71% 0.16%
GCA_000149105.2 Lactobacillus iners LactinV 03V1-b Lactobacillus iners LactinV 03V1-b PRJNA52035 SAMN00115037 32.7% 1,303,958 67 1,434 ☆☆☆ Contig 94.38% 0.23%
GCA_000309645.1 Lactobacillus paracasei CRF28 Lactobacillus casei CRF28 PRJNA68467 SAMN02472005 46.3% 3,036,548 57 3,018 ☆☆☆☆ Contig 98.6% 0.48% The organism name was amended based on the ANI result.
GCA_000177575.1 Lactobacillus crispatus 214-1 Lactobacillus crispatus 214-1 PRJNA40665 SAMN00003361 36.9% 2,068,805 187 2,070 ☆☆☆☆ Contig 99.03% 0.38%
GCA_000184285.2 Lactobacillus coryniformis subsp. torquens KCTC 3535 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 PRJNA60401 SAMN02470831 42.9% 2,811,629 402 2,771 ☆☆☆ Contig 98.44% 5.71%
GCA_000309625.1 Lactobacillus paracasei A2-362 Lactobacillus casei A2-362 PRJNA68465 SAMN02472007 46.1% 3,361,266 167 3,388 ☆☆☆☆ Contig 98.94% 0.65% The organism name was amended based on the ANI result.
GCA_000255515.2 Lactobacillus vini JP7.8.9 Lactobacillus vini JP7.8.9 PRJNA81093 SAMN02471381 37.7% 2,275,066 837 2,347 ☆☆☆ Contig 94.44% 2.43%
GCA_000215465.2 Lactobacillus salivarius NIAS840 Lactobacillus salivarius NIAS840 PRJNA66655 SAMN02470897 33.0% 2,046,557 4 1,915 ☆☆☆☆ Contig 99.03% 0.38%
GCA_000143745.1 Lactobacillus plantarum subsp. plantarum ATCC 14917 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA31515 SAMN00001478 type strain 44.5% 3,212,261 9 2,999 ☆☆☆☆ Scaffold 98.39% 1.53%
GCA_000224985.1 Lactobacillus ruminis ATCC 27782 Lactobacillus ruminis ATCC 27782 PRJNA70721 SAMN02603606 43.5% 2,066,652 1 1,978 ☆☆☆☆☆ Complete Genome 98.17% 0.48%
GCA_000023085.1 Lactobacillus plantarum JDM1 Lactobacillus plantarum JDM1 PRJNA32969 SAMN02603864 44.7% 3,197,759 1 2,980 ☆☆☆☆☆ Complete Genome 99.35% 1.53%
GCA_000155515.2 Lactobacillus paracasei subsp. paracasei 8700:2 Lactobacillus paracasei subsp. paracasei 8700:2 PRJNA30077 SAMN02463682 46.3% 3,025,352 3 2,901 ☆☆☆☆☆ Complete Genome 99.35% 0.48%
GCA_000309585.1 Lactobacillus paracasei 21/1 Lactobacillus casei 21/1 PRJNA68459 SAMN02472009 46.2% 3,215,878 75 3,254 ☆☆☆☆ Contig 98.91% 0.48% The organism name was amended based on the ANI result.
GCA_000260455.1 Lactobacillus versmoldensis KCTC 3814 Lactobacillus versmoldensis DSM 14857 = KCTC 3814 PRJDA68089 38.2% 2,396,658 93 2,366 ☆☆☆☆ Contig 99.14% 1.43%
GCA_000179935.1 Lactobacillus iners LEAF 2053A-b Lactobacillus iners LEAF 2053A-b PRJNA52041 SAMN00115039 32.4% 1,368,717 37 1,279 ☆☆☆☆ Contig 99.35% 0.34%
GCA_000296855.1 Lactobacillus gigeriorum CRBIP 24.85 Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 PRJEB102 SAMEA2272557 type strain 36.9% 1,927,182 96 1,891 ☆☆☆☆ Contig 98.39% 0.18%
GCA_000260435.1 Lactobacillus zeae KCTC 3804 Lactobacillus zeae DSM 20178 = KCTC 3804 PRJDA68087 type strain 47.8% 3,109,071 105 2,957 ☆☆☆☆ Contig 99.03% 0.27%
GCA_000387565.1 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 PRJNA171594 SAMN02471706 type strain 50.2% 1,730,812 75 1,677 ☆☆☆☆ Contig 98.87% 0.16%
GCA_000410035.1 Lactobacillus paracasei subsp. paracasei Lpp49 Lactobacillus paracasei subsp. paracasei Lpp49 PRJNA178441 SAMN02469726 46.2% 2,924,421 109 2,791 ☆☆☆☆ Contig 99.35% 0.79%
GCA_000410075.1 Lactobacillus paracasei subsp. paracasei CNCM I-4648 Lactobacillus paracasei subsp. paracasei CNCM I-4648 PRJNA178443 SAMN03177793 46.1% 2,831,061 852 2,802 ☆☆☆ Contig 92.72% 2.59%
GCA_000410295.1 Lactobacillus paracasei subsp. paracasei Lpp189 Lactobacillus paracasei subsp. paracasei Lpp189 PRJNA178430 SAMN02469702 46.2% 2,923,257 295 2,826 ☆☆☆☆ Contig 98.91% 0.5%
GCA_000410355.1 Lactobacillus paracasei subsp. paracasei Lpp126 Lactobacillus paracasei subsp. paracasei Lpp126 PRJNA178434 SAMN02469721 46.1% 2,702,647 1,355 2,698 ☆☆☆ Contig 83.44% 2.46%
GCA_000415925.1 Lactobacillus otakiensis JCM 15040 Lactobacillus otakiensis DSM 19908 = JCM 15040 PRJDB1128 type strain 42.4% 2,346,301 34 2,259 ☆☆☆☆ Contig 99.03% 0.81%
GCA_000423245.1 Lactobacillus ceti DSM 22408 Lactobacillus ceti DSM 22408 PRJNA185632 SAMN02441169 type strain 33.7% 1,385,752 17 1,269 ☆☆☆☆ Scaffold 97.74% 1.24%
GCA_000425885.1 Lactobacillus harbinensis DSM 16991 Lactobacillus harbinensis DSM 16991 PRJNA188920 SAMN02440850 type strain 53.1% 3,134,829 101 3,049 ☆☆☆☆ Scaffold 98.23% 2.39%
GCA_000439275.1 Lactobacillus reuteri TD1 Lactobacillus reuteri TD1 PRJNA211728 SAMN02604178 38.8% 2,145,445 1 1,981 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000469365.1 Lactobacillus brevis ATCC 14869 Lactobacillus brevis ATCC 14869 = DSM 20054 PRJNA38325 SAMN02436750 type strain 45.9% 2,473,047 86 2,396 ☆☆☆☆ Scaffold 97.68% 1.34%
GCA_000477515.1 Lactobacillus fermentum MTCC 8711 Lactobacillus fermentum MTCC 8711 PRJNA212396 SAMN02470291 49.7% 2,566,297 116 2,854 ☆☆☆☆ Contig 98.68% 2.18%
GCA_000478625.2 Lactobacillus sakei subsp. sakei LS25 Lactobacillus sakei subsp. sakei LS25 PRJNA186903 SAMN02178497 40.9% 2,030,219 38 1,964 ☆☆☆☆ Contig 98.71% 0.16%
GCA_001433765.1 Lactobacillus coryniformis subsp. coryniformis DSM 20001 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 PRJNA222257 SAMN02369482 type strain 42.9% 2,705,076 198 2,579 ☆☆☆☆ Scaffold 99.03% 4.5%
GCA_000507045.1 Lactobacillus plantarum 4_3 Lactobacillus plantarum 4_3 PRJNA214266 SAMN02303046 44.3% 3,320,363 105 3,110 ☆☆☆☆ Contig 99.03% 2.18%
GCA_000526755.1 Lactobacillus brevis AG48 Lactobacillus brevis AG48 PRJNA214528 SAMN02584991 45.7% 2,595,994 9 2,631 ☆☆☆☆ Contig 99.03% 0.24%
GCA_000526815.1 Pediococcus acidilactici AGR20 Pediococcus acidilactici AGR20 PRJNA214531 SAMN02584994 42.4% 1,924,318 2 1,871 ☆☆☆☆ Contig 99.76% 0.58%
GCA_000583695.1 Lactobacillus composti JCM 14202 Lactobacillus composti DSM 18527 = JCM 14202 PRJDB649 SAMD00003395 type strain 43.9% 3,449,704 94 3,959 ☆☆☆☆ Contig 97.18% 3.28%
GCA_000612445.1 Lactobacillus sucicola JCM 15457 Lactobacillus sucicola DSM 21376 = JCM 15457 PRJDB622 SAMD00009355 type strain 38.4% 2,454,642 15 2,448 ☆☆☆☆ Contig 97.62% 0.16%
GCA_000712515.1 Lactobacillus rhamnosus PEL6 Lactobacillus rhamnosus PEL6 PRJNA237054 SAMN02602921 46.7% 2,876,865 67 2,702 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000751635.1 Lactobacillus delbrueckii subsp. bulgaricus unkown Lactobacillus delbrueckii subsp. bulgaricus PRJEB5826 SAMEA2580764 49.8% 1,853,236 14 1,909 ☆☆☆☆ Scaffold 98.9% 0.16%
GCA_000751655.1 Lactobacillus delbrueckii subsp. lactis unkown Lactobacillus delbrueckii subsp. lactis PRJEB5824 SAMEA2547934 50.0% 1,910,730 10 1,842 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000751695.2 Lactobacillus delbrueckii subsp. lactis unkown Lactobacillus delbrueckii subsp. lactis PRJEB5822 SAMEA2547921 49.8% 2,105,434 1 1,926 ☆☆☆☆ Scaffold 98.31% 0.16%
GCA_000758365.1 Lactobacillus salivarius JCM1046 Lactobacillus salivarius PRJNA242957 SAMN02711722 33.0% 2,320,461 5 2,295 ☆☆☆☆☆ Complete Genome 98.44% 0.91%
GCA_000764285.1 Lactobacillus plantarum FMNP01 Lactobacillus plantarum PRJNA256799 SAMN02947174 44.5% 3,313,644 4 3,090 ☆☆☆☆ Scaffold 99.35% 2.18%
GCA_000784375.1 Lactobacillus rhamnosus L34 Lactobacillus rhamnosus L34 PRJNA217081 SAMN02324555 46.8% 2,937,717 51 2,749 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000786395.1 Lactobacillus acidophilus ATCC 4356 Lactobacillus acidophilus PRJNA263693 SAMN03105773 type strain 34.6% 1,956,698 20 1,884 ☆☆☆☆ Contig 99.03% 0.22%
GCA_000829035.1 Lactobacillus paracasei subsp. paracasei JCM 8130 Lactobacillus paracasei subsp. paracasei JCM 8130 PRJDB478 type strain 46.6% 3,017,804 3 2,945 ☆☆☆☆☆ Complete Genome 99.35% 0.48%
GCA_000934625.1 Lactobacillus acidophilus FSI4 Lactobacillus acidophilus PRJNA271341 SAMN03274004 34.7% 1,991,969 1 1,860 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_000956195.1 Lactobacillus plantarum CIP104448 Lactobacillus plantarum PRJNA263714 SAMN03160619 44.4% 3,237,330 178 3,042 ☆☆☆☆ Contig 99.03% 1.75%
GCA_000961015.1 Lactobacillus helveticus KLDS1.8701 Lactobacillus helveticus PRJNA266376 SAMN03164100 36.9% 2,106,631 2 2,255 ☆☆☆☆☆ Complete Genome 98.87% 0.16%
GCA_000970855.1 Lactobacillus helsingborgensis Bma5 Lactobacillus helsingborgensis PRJNA257138 SAMN03275732 type strain 36.3% 2,020,254 10 1,823 ☆☆☆☆ Scaffold 98.06% 0.83%
GCA_001012655.1 Lactobacillus jensenii IM11 Lactobacillus jensenii IM11 PRJNA231005 SAMN02438378 34.0% 1,614,827 91 1,505 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001012735.1 Lactobacillus jensenii IM1 Lactobacillus jensenii IM1 PRJNA231005 SAMN02438382 34.1% 1,541,635 112 1,423 ☆☆☆☆ Scaffold 98.61% 0.16%
GCA_001044415.1 Lactobacillus rhamnosus 313 Lactobacillus rhamnosus PRJNA287248 SAMN03766175 46.6% 2,934,531 78 2,765 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001050435.1 Lactobacillus koreensis 26-25 Lactobacillus koreensis PRJNA285019 SAMN03734960 49.2% 3,006,812 1 2,720 ☆☆☆☆☆ Complete Genome 99.35% 0.89%
GCA_001050475.1 Lactobacillus ginsenosidimutans EMML 3141 Lactobacillus ginsenosidimutans PRJNA285015 SAMN03734923 type strain 36.7% 2,590,556 1 2,558 ☆☆☆☆☆ Complete Genome 98.49% 0.16%
GCA_001066975.1 Lactobacillus rhamnosus 699_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197902 46.5% 2,955,695 220 2,766 ☆☆☆☆ Contig 99.35% 0.48%
GCA_001068045.1 Lactobacillus rhamnosus 988_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198209 46.6% 3,046,339 167 2,832 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001308195.1 Lactobacillus kunkeei LMbo Lactobacillus kunkeei PRJNA270973 SAMN03277051 37.1% 1,560,079 31 1,401 ☆☆☆☆ Contig 97.9% 0.81%
GCA_001308205.1 Lactobacillus kunkeei LAdo Lactobacillus kunkeei PRJNA270963 SAMN03277032 36.6% 1,406,916 9 1,271 ☆☆☆☆ Contig 97.9% 0.59%
GCA_001311115.1 Lactobacillus lindneri JCM 11027 Lactobacillus lindneri DSM 20690 = JCM 11027 PRJDB761 SAMD00000414 type strain 34.1% 1,436,854 28 1,632 ☆☆☆☆ Contig 98.69% 1.03%
GCA_001311275.1 Lactobacillus delbrueckii subsp. bulgaricus JCM 1002 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 PRJDB769 SAMD00000406 type strain 49.8% 1,738,803 75 2,506 ☆☆☆ Contig 92.12% 0.16%
GCA_001311485.1 Lactobacillus ozensis JCM 17196 Lactobacillus ozensis DSM 23829 = JCM 17196 PRJDB779 SAMD00000456 type strain 31.9% 1,470,202 43 2,408 ☆☆☆ Contig 88.71% 1.18%
GCA_001311505.1 Lactobacillus hokkaidonensis JCM 18461 Lactobacillus hokkaidonensis JCM 18461 PRJDB780 SAMD00000460 type strain 38.1% 2,335,811 67 3,490 ☆☆☆ Contig 93.87% 4.8%
GCA_001311745.1 Lactobacillus kefiri JCM 5818 Lactobacillus kefiri DSM 20587 = JCM 5818 PRJDB803 SAMD00000469 type strain 41.6% 2,501,983 141 3,574 ☆☆☆ Contig 90.57% 1.13%
GCA_001314945.1 Lactobacillus kunkeei MP2 Lactobacillus kunkeei PRJNA298292 SAMN04157996 36.9% 1,614,522 1 1,468 ☆☆☆☆☆ Complete Genome 97.9% 2.53%
GCA_001434135.1 Lactobacillus kisonensis DSM 19906 Lactobacillus kisonensis DSM 19906 = JCM 15041 PRJNA222257 SAMN02369458 type strain 41.7% 3,006,215 122 2,758 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001434145.1 Lactobacillus otakiensis DSM 19908 Lactobacillus otakiensis DSM 19908 = JCM 15040 PRJNA222257 SAMN02369465 type strain 42.4% 2,346,188 21 2,255 ☆☆☆☆ Scaffold 99.03% 0.81%
GCA_001434275.1 Lactobacillus mindensis DSM 14500 Lactobacillus mindensis DSM 14500 PRJNA222257 SAMN02369489 type strain 38.2% 2,336,411 103 2,213 ☆☆☆☆ Scaffold 99.14% 3.47%
GCA_001434315.1 Lactobacillus oligofermentans DSM 15707 Lactobacillus oligofermentans DSM 15707 = LMG 22743 PRJNA222257 SAMN02369429 type strain 35.6% 1,832,229 32 1,770 ☆☆☆☆ Scaffold 99.35% 0.27%
GCA_001434435.1 Lactobacillus kitasatonis DSM 16761 Lactobacillus kitasatonis DSM 16761 = JCM 1039 PRJNA222257 SAMN02369418 type strain 37.5% 1,911,334 45 1,921 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_001434455.1 Lactobacillus hayakitensis DSM 18933 Lactobacillus hayakitensis DSM 18933 = JCM 14209 PRJNA222257 SAMN02369399 type strain 34.0% 1,685,542 108 1,583 ☆☆☆☆ Scaffold 97.37% 0.08%
GCA_001434465.1 Lactobacillus oris DSM 4864 Lactobacillus oris DSM 4864 PRJNA222257 SAMN02369408 type strain 50.0% 2,031,774 75 1,925 ☆☆☆☆ Contig 99.35% 0.24%
GCA_001434575.1 Lactobacillus bifermentans DSM 20003 Lactobacillus bifermentans DSM 20003 PRJNA222257 SAMN02369366 type strain 44.3% 3,133,992 147 3,040 ☆☆☆☆ Scaffold 99.35% 3.87%
GCA_001434635.1 Lactobacillus delbrueckii subsp. lactis DSM 20072 Lactobacillus delbrueckii subsp. lactis DSM 20072 PRJNA222257 SAMN02369369 type strain 49.9% 1,870,053 222 1,817 ☆☆☆☆ Scaffold 99.03% 0.0%
GCA_001434775.1 Lactobacillus farciminis DSM 20184 Lactobacillus farciminis KCTC 3681 = DSM 20184 PRJNA222257 SAMN02369427 type strain 36.4% 2,480,845 76 2,417 ☆☆☆☆ Contig 99.14% 3.28%
GCA_000409875.1 Lactobacillus paracasei subsp. paracasei Lpp46 Lactobacillus paracasei subsp. paracasei Lpp46 PRJNA178451 SAMN02469709 46.3% 2,932,016 90 2,780 ☆☆☆☆ Contig 99.03% 0.48%
GCA_001434895.1 Lactobacillus odoratitofui DSM 19909 Lactobacillus odoratitofui DSM 19909 = JCM 15043 PRJNA222257 SAMN02369464 type strain 44.2% 2,751,938 31 2,405 ☆☆☆☆ Scaffold 98.71% 0.24%
GCA_001434915.1 Lactobacillus capillatus DSM 19910 Lactobacillus capillatus DSM 19910 PRJNA222257 SAMN02369440 type strain 37.6% 2,232,918 61 2,102 ☆☆☆☆ Scaffold 99.03% 1.34%
GCA_001434945.1 Lactobacillus helveticus CGMCC 1.1877 Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 PRJNA222257 SAMN02369370 type strain 36.8% 1,828,717 257 1,938 ☆☆☆☆ Scaffold 98.23% 0.16%
GCA_001434975.1 Lactobacillus gallinarum DSM 10532 Lactobacillus gallinarum DSM 10532 = JCM 2011 PRJNA222257 SAMN02369396 type strain 36.5% 1,937,187 86 1,921 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_001435035.1 Lactobacillus manihotivorans DSM 13343 Lactobacillus manihotivorans DSM 13343 = JCM 12514 PRJNA222257 SAMN02369461 type strain 47.7% 3,125,880 335 3,050 ☆☆☆☆ Scaffold 99.19% 1.56%
GCA_001435135.1 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae DSM 15814 PRJNA222257 SAMN02369495 type strain 43.3% 2,865,290 61 2,707 ☆☆☆☆ Contig 99.35% 2.1%
GCA_001435445.1 Lactobacillus paralimentarius DSM 13961 Lactobacillus paralimentarius DSM 13961 = JCM 10707 PRJNA222257 SAMN02369457 35.1% 2,746,576 28 2,633 ☆☆☆☆ Scaffold 99.14% 4.22%
GCA_001435715.1 Lactobacillus sakei subsp. carnosus DSM 15831 Lactobacillus sakei subsp. carnosus DSM 15831 PRJNA222257 SAMN02369430 type strain 41.0% 1,985,394 65 1,991 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001435935.1 Lactobacillus panis DSM 6035 Lactobacillus panis DSM 6035 PRJNA222257 SAMN02369492 type strain 48.1% 2,006,512 150 1,904 ☆☆☆☆ Scaffold 99.35% 1.53%
GCA_001435975.1 Lactobacillus collinoides DSM 20515 Lactobacillus collinoides DSM 20515 = JCM 1123 PRJNA222257 SAMN02369441 type strain 46.1% 3,616,190 130 3,224 ☆☆☆☆ Scaffold 99.03% 1.34%
GCA_001436185.1 Lactobacillus amylophilus DSM 20533 Lactobacillus amylophilus DSM 20533 = JCM 1125 PRJNA222257 SAMN02369500 type strain 43.6% 1,556,969 33 1,561 ☆☆☆☆ Scaffold 98.06% 2.18%
GCA_001436255.1 Lactobacillus rapi DSM 19907 Lactobacillus rapi DSM 19907 = JCM 15042 PRJNA222257 SAMN02369472 type strain 42.9% 2,854,844 87 2,644 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001436305.1 Lactobacillus ultunensis DSM 16047 Lactobacillus ultunensis DSM 16047 PRJNA222257 SAMN02369416 type strain 35.9% 2,161,766 105 2,100 ☆☆☆☆ Contig 98.39% 0.81%
GCA_001436315.1 Lactobacillus aviarius subsp. aviarius DSM 20655 Lactobacillus aviarius subsp. aviarius DSM 20655 PRJNA222257 SAMN02369392 type strain 40.1% 1,680,526 24 1,585 ☆☆☆☆ Scaffold 99.11% 1.56%
GCA_001436555.1 Lactobacillus senioris DSM 24302 Lactobacillus senioris DSM 24302 = JCM 17472 PRJNA222257 SAMN02369415 type strain 39.1% 1,566,789 9 1,568 ☆☆☆☆ Scaffold 99.3% 1.21%
GCA_001436575.1 Lactobacillus gigeriorum DSM 23908 Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 PRJNA222257 SAMN02369397 type strain 36.9% 1,906,034 116 1,848 ☆☆☆☆ Contig 98.39% 0.16%
GCA_001436595.1 Lactobacillus similis DSM 23365 Lactobacillus similis DSM 23365 = JCM 2765 PRJNA222257 SAMN02369474 type strain 47.0% 3,476,170 181 3,095 ☆☆☆☆ Scaffold 99.35% 1.1%
GCA_001436615.1 Lactobacillus camelliae DSM 22697 Lactobacillus camelliae DSM 22697 = JCM 13995 PRJNA222257 SAMN02369434 type strain 55.4% 2,562,179 104 2,404 ☆☆☆☆ Scaffold 99.35% 1.32%
GCA_001436675.1 Lactobacillus senmaizukei DSM 21775 Lactobacillus senmaizukei DSM 21775 = NBRC 103853 PRJNA222257 SAMN02369473 type strain 48.6% 2,222,963 68 2,122 ☆☆☆☆ Scaffold 98.39% 0.16%
GCA_001436935.1 Lactobacillus fructivorans DSM 20350 Lactobacillus fructivorans PRJNA222257 SAMN02797779 38.9% 1,380,729 47 1,368 ☆☆☆☆ Scaffold 98.55% 0.43%
GCA_001437055.1 Lactobacillus secaliphilus DSM 17896 Lactobacillus secaliphilus PRJNA222257 SAMN02797776 type strain 47.7% 1,646,143 11 1,503 ☆☆☆☆ Scaffold 97.58% 0.48%
GCA_001437125.1 Lactobacillus paucivorans DSM 22467 Lactobacillus paucivorans PRJNA222257 SAMN02797785 type strain 49.1% 2,362,603 167 2,210 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001437465.1 Lactobacillus saniviri DSM 24301 Lactobacillus saniviri JCM 17471 = DSM 24301 PRJNA222257 SAMN02797787 type strain 47.7% 2,435,824 77 2,413 ☆☆☆☆ Scaffold 98.87% 0.7%
GCA_001437515.1 Lactobacillus parabrevis LMG 11984 Lactobacillus parabrevis PRJNA222257 SAMN02797792 type strain 49.0% 2,660,050 123 2,374 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001437605.1 Pediococcus argentinicus DSM 23026 Pediococcus argentinicus PRJNA222257 SAMN02797819 type strain 36.7% 1,764,961 93 1,776 ☆☆☆ Scaffold 91.34% 3.38%
GCA_001438825.1 Lactobacillus crustorum LMG 23699 Lactobacillus crustorum PRJNA222257 SAMN02797794 type strain 35.0% 2,235,695 87 2,165 ☆☆☆☆ Scaffold 99.14% 1.77%
GCA_001438865.1 Lactobacillus pobuzihii NBRC 103219 Lactobacillus pobuzihii PRJNA222257 SAMN02797797 type strain 37.7% 2,340,699 71 2,121 ☆☆☆☆ Scaffold 98.39% 1.02%
GCA_000410395.1 Lactobacillus paracasei subsp. paracasei Lpp41 Lactobacillus paracasei subsp. paracasei Lpp41 PRJNA178436 SAMN02469724 46.1% 2,705,356 827 2,763 ☆☆☆ Contig 94.99% 1.64%
GCA_000466805.1 Lactobacillus jensenii MD IIE-70(2) Lactobacillus jensenii MD IIE-70(2) PRJNA213997 SAMN02298798 34.3% 1,759,880 60 2,044 ☆☆☆☆ Contig 97.34% 0.5%
GCA_000473935.1 Lactobacillus plantarum LP91 Lactobacillus plantarum LP91 PRJNA221362 SAMN02470621 45.1% 2,925,584 145 2,667 ☆☆☆☆ Contig 98.94% 1.53%
GCA_000165775.3 Lactobacillus helveticus R0052 Lactobacillus helveticus R0052 PRJNA51767 SAMN02603348 36.8% 2,129,206 1 2,288 ☆☆☆☆☆ Complete Genome 98.87% 0.16%
GCA_000159355.1 Lactobacillus johnsonii ATCC 33200 Lactobacillus johnsonii ATCC 33200 PRJNA31495 SAMN00001472 type strain 34.5% 1,780,499 32 1,763 ☆☆☆☆ Scaffold 99.25% 0.38%
GCA_000685785.1 Lactobacillus animalis 381-IL-28 Lactobacillus animalis PRJNA244367 SAMN02725516 41.1% 1,851,996 30 1,851 ☆☆☆☆ Contig 99.09% 0.16%
GCA_000177415.1 Lactobacillus gasseri 224-1 Lactobacillus gasseri 224-1 PRJNA40683 SAMN00009758 35.0% 2,005,522 37 2,225 ☆☆☆☆ Contig 96.91% 0.48%
GCA_000026065.1 Lactobacillus sakei subsp. sakei 23K Lactobacillus sakei subsp. sakei 23K PRJNA13435 SAMEA3138223 41.3% 1,884,661 1 1,849 ☆☆☆☆☆ Complete Genome 98.71% 0.16% Shows 98.2% ANI value against Lactobacillus sakei subsp. carnosus.
GCA_000493335.1 Lactobacillus helveticus CIRM-BIA 103 Lactobacillus helveticus CIRM-BIA 103 PRJEB1537 SAMEA2271977 36.5% 2,007,466 191 2,121 ☆☆☆☆ Scaffold 98.87% 0.16%
GCA_000493575.1 Lactobacillus helveticus CIRM-BIA 101 Lactobacillus helveticus CIRM-BIA 101 PRJEB1536 SAMEA2272118 37.2% 2,074,014 213 2,228 ☆☆☆☆ Contig 98.23% 0.16%
GCA_000388095.2 Lactobacillus paracasei LcY Lactobacillus casei LcY PRJNA196992 SAMN02046319 46.3% 3,102,374 2 3,013 ☆☆☆☆☆ Chromosome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000410135.1 Lactobacillus paracasei subsp. paracasei Lpp17 Lactobacillus paracasei subsp. paracasei Lpp17 PRJNA178449 SAMN02469707 46.4% 2,954,673 131 2,841 ☆☆☆☆ Contig 99.35% 0.56%
GCA_000410195.1 Lactobacillus paracasei subsp. paracasei Lpp219 Lactobacillus paracasei subsp. paracasei Lpp219 PRJNA178423 SAMN02469710 46.3% 3,059,079 238 3,004 ☆☆☆☆ Contig 98.17% 1.26%
GCA_000428925.1 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae DSM 15814 PRJNA185359 SAMN02441207 type strain 43.3% 2,862,294 39 2,700 ☆☆☆☆ Scaffold 99.35% 2.1%
GCA_000276905.1 Lactobacillus mali DSM 20444 Lactobacillus mali KCTC 3596 = DSM 20444 PRJNA84435 SAMN02471469 type strain 36.2% 2,149,363 196 2,047 ☆☆☆ Contig 89.35% 1.02%
GCA_000277855.1 Lactobacillus rossiae DSM 15814 Lactobacillus rossiae DSM 15814 PRJNA165045 SAMN02471396 type strain 43.6% 2,958,459 233 2,730 ☆☆☆☆ Scaffold 99.35% 2.31%
GCA_000604105.1 Lactobacillus plantarum DOMLa Lactobacillus plantarum DOMLa PRJNA191579 44.6% 3,210,111 3 2,988 ☆☆☆☆☆ Complete Genome 99.35% 1.53%
GCA_000159375.2 Lactobacillus ruminis ATCC 25644 Lactobacillus ruminis ATCC 25644 PRJNA31499 SAMN00001480 43.7% 2,108,740 7 1,980 ☆☆☆☆ Scaffold 98.95% 0.81%
GCA_000285875.1 Pediococcus pentosaceus IE-3 Pediococcus pentosaceus IE-3 PRJEA80991 SAMEA2272526 37.2% 1,802,376 91 1,738 ☆☆☆☆ Contig 99.69% 0.48%
GCA_000091405.1 Lactobacillus johnsonii FI9785 Lactobacillus johnsonii FI9785 PRJEA36575 SAMEA2272487 34.4% 1,785,116 3 1,740 ☆☆☆☆☆ Complete Genome 99.25% 0.16%
GCA_000493515.1 Lactobacillus helveticus CIRM-BIA 953 Lactobacillus helveticus CIRM-BIA 953 PRJEB1542 SAMEA2272618 37.0% 2,385,421 202 2,525 ☆☆☆☆ Contig 98.87% 0.81%
GCA_000432055.1 Lactobacillus ruminis CAG:367 Lactobacillus ruminis CAG:367 PRJEB852 SAMEA3138490 43.8% 1,953,965 141 1,804 ☆☆☆☆ Scaffold 98.06% 0.48%
GCA_000180015.1 Lactobacillus oris PB013-T2-3 Lactobacillus oris PB013-T2-3 PRJNA54025 SAMN00116776 49.8% 2,115,990 89 2,014 ☆☆☆☆ Contig 99.35% 0.89%
GCA_000508845.1 Lactobacillus paracasei COM0101 Lactobacillus paracasei COM0101 PRJDB479 SAMD00016729 46.3% 3,003,364 184 2,912 ☆☆☆☆ Contig 97.96% 0.65%
GCA_000466885.2 Lactobacillus crispatus 2029 Lactobacillus crispatus 2029 PRJNA213996 SAMN02298797 36.9% 2,193,123 295 2,481 ☆☆☆☆ Contig 96.34% 0.74%
GCA_000309765.1 Lactobacillus paracasei Lc-10 Lactobacillus casei Lc-10 PRJNA68485 SAMN02472012 46.4% 2,951,397 76 2,821 ☆☆☆☆ Contig 99.35% 1.24% The organism name was amended based on the ANI result.
GCA_000418475.1 Lactobacillus rhamnosus LOCK900 Lactobacillus rhamnosus LOCK900 PRJNA196481 SAMN02603328 46.8% 2,883,376 1 2,650 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000389675.2 Lactobacillus acidophilus La-14 Lactobacillus acidophilus La-14 PRJNA196176 SAMN02603216 34.7% 1,991,579 1 1,867 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_000410055.1 Lactobacillus paracasei subsp. paracasei Lpp227 Lactobacillus paracasei subsp. paracasei Lpp227 PRJNA178442 SAMN02641494 46.3% 2,906,821 596 2,808 ☆☆☆☆ Contig 95.91% 2.62%
GCA_000648755.1 Lactobacillus plantarum subsp. plantarum wikim18 Lactobacillus plantarum subsp. plantarum PRJNA245118 SAMN02732144 44.3% 3,352,666 323 3,216 ☆☆☆☆ Contig 98.98% 1.85%
GCA_000410015.1 Lactobacillus paracasei subsp. paracasei Lpp221 Lactobacillus paracasei subsp. paracasei Lpp221 PRJNA178437 SAMN02469717 46.2% 3,044,896 265 2,914 ☆☆☆☆ Contig 98.11% 0.79%
GCA_000496265.1 Pediococcus pentosaceus SL4 Pediococcus pentosaceus SL4 PRJNA222573 SAMN02603952 37.3% 1,789,138 1 1,755 ☆☆☆☆☆ Complete Genome 98.98% 1.25%
GCA_000235705.2 Lactobacillus curvatus CRL 705 Lactobacillus curvatus CRL 705 PRJNA71471 SAMN02469461 41.9% 1,838,358 145 1,833 ☆☆☆☆ Contig 98.39% 0.24%
GCA_000014525.1 Lactobacillus paracasei ATCC 334 Lactobacillus casei ATCC 334 PRJNA402 SAMN02598528 46.6% 2,924,325 2 2,835 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000183825.1 Lactobacillus animalis KCTC 3501 Lactobacillus animalis KCTC 3501 = DSM 20602 PRJNA60479 SAMN02470201 41.1% 1,882,795 7 1,839 ☆☆☆☆ Scaffold 98.44% 0.16%
GCA_000318035.1 Lactobacillus paracasei W56 Lactobacillus casei W56 PRJEB219 SAMEA2271945 46.3% 3,132,096 2 3,145 ☆☆☆☆☆ Complete Genome 99.03% 0.48% The organism name was amended based on the ANI result.
GCA_000615885.1 Lactobacillus apodemi JCM 16172 Lactobacillus apodemi DSM 16634 = JCM 16172 PRJDB651 SAMD00011178 type strain 38.6% 2,073,290 63 2,203 ☆☆☆☆ Contig 97.8% 0.48%
GCA_000442825.1 Lactobacillus acidophilus DSM 20242 Lactobacillus acidophilus DSM 20242 PRJEB1533 SAMEA2272474 34.7% 2,047,860 21 1,905 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000442765.1 Lactobacillus amylovorus CAG:719 Lactobacillus amylovorus CAG:719 PRJEB988 SAMEA3138807 38.1% 1,816,655 55 1,838 ☆☆☆☆ Scaffold 98.87% 0.16%
GCA_000422165.1 Lactobacillus helveticus CNRZ32 Lactobacillus helveticus CNRZ32 PRJNA46731 SAMN02604285 36.9% 2,225,962 1 2,407 ☆☆☆☆☆ Complete Genome 98.87% 0.16%
GCA_000423265.1 Lactobacillus saerimneri DSM 16049 Lactobacillus saerimneri DSM 16049 PRJNA185633 SAMN02440837 type strain 42.5% 1,720,753 47 1,726 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_000409855.1 Lactobacillus paracasei subsp. paracasei Lpp122 Lactobacillus paracasei subsp. paracasei Lpp122 PRJNA178447 SAMN02469705 46.5% 2,920,756 201 2,794 ☆☆☆☆ Contig 99.35% 0.7%
GCA_000409815.1 Lactobacillus paracasei subsp. paracasei Lpp230 Lactobacillus paracasei subsp. paracasei Lpp230 PRJNA178448 SAMN02469722 46.3% 2,892,319 144 2,764 ☆☆☆☆ Contig 99.3% 0.48%
GCA_000225325.1 Lactobacillus sanfranciscensis TMW 1.1304 Lactobacillus sanfranciscensis TMW 1.1304 PRJNA43579 SAMN02603515 34.8% 1,375,770 3 1,402 ☆☆☆☆☆ Complete Genome 99.17% 0.6%
GCA_000712555.1 Lactobacillus reuteri LTH2584 Lactobacillus reuteri PRJNA248653 SAMN02800394 38.5% 2,066,054 25 2,082 ☆☆☆☆ Contig 99.35% 0.46%
GCA_000751235.1 Lactobacillus delbrueckii subsp. lactis unkown Lactobacillus delbrueckii subsp. lactis PRJEB5823 SAMEA2547923 49.5% 2,051,578 23 1,956 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000813025.1 Lactobacillus ruminis DPC 6832 Lactobacillus ruminis DPC 6832 PRJNA219505 SAMN02358827 43.1% 1,943,931 128 1,832 ☆☆☆☆ Contig 95.53% 0.56%
GCA_000814185.1 Lactobacillus casei FMNP02 Lactobacillus sp. FMNP02 PRJNA271220 SAMN03273315 47.8% 2,990,020 15 2,934 ☆☆☆☆ Scaffold 98.87% 0.27% The organism name was inferred from ANI result. (100% against L. casei)
GCA_000829055.1 Lactobacillus casei ATCC 393 Lactobacillus casei subsp. casei ATCC 393 PRJDB480 type strain 47.9% 2,952,961 3 2,890 ☆☆☆☆☆ Complete Genome 98.87% 0.27%
GCA_000831645.3 Lactobacillus heilongjiangensis DSM 28069 Lactobacillus heilongjiangensis PRJNA258033 SAMN02983013 type strain 37.5% 2,790,548 1 2,485 ☆☆☆☆☆ Complete Genome 99.14% 1.85%
GCA_000965255.1 Lactobacillus spicheri LP38 Lactobacillus spicheri PRJNA276920 SAMN03382534 55.4% 2,855,212 25 2,571 ☆☆☆☆ Contig 99.01% 0.16%
GCA_001013375.1 Lactobacillus casei N87 Lactobacillus casei PRJNA282947 SAMN03580836 47.9% 3,001,027 26 2,795 ☆☆☆☆ Contig 99.35% 0.27% Shows 96.8% ANI value against L. zeae DSM 20178T and 94.3% against L. casei ATCC 393T.
GCA_001039735.1 Lactobacillus fermentum L930BB Lactobacillus fermentum L930BB PRJEB4718 SAMEA3158477 52.1% 1,971,838 72 1,896 ☆☆☆☆ Contig 98.79% 0.24%
GCA_001044085.1 Lactobacillus rhamnosus Lr053 Lactobacillus rhamnosus PRJNA253894 SAMN03196655 46.5% 2,724,032 921 2,574 ☆☆☆ Contig 89.68% 4.01%
GCA_001064785.1 Lactobacillus rhamnosus 390_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197581 46.6% 2,966,799 391 2,709 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001068015.1 Lactobacillus rhamnosus 979_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198199 46.6% 3,014,883 319 2,832 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001188635.1 Lactobacillus farciminis CNCM-I-3699-R Lactobacillus farciminis PRJNA284511 SAMN03703094 35.6% 2,430,580 2 2,327 ☆☆☆☆☆ Chromosome 99.14% 1.34% Shows 90.6% ANI against L. farciminis, 90.5% ANI against L. futsaii.
GCA_001243975.1 Lactobacillus agilis Marseille Lactobacillus agilis PRJEB9399 SAMEA3393060 41.7% 2,134,779 16 2,030 ☆☆☆☆ Scaffold 98.06% 2.31%
GCA_001311645.1 Lactobacillus curvatus JCM 1096 Lactobacillus curvatus JCM 1096 = DSM 20019 PRJDB798 SAMD00000413 type strain 41.9% 1,814,792 72 2,869 ☆☆☆ Contig 93.08% 0.33%
GCA_001311785.1 Lactobacillus saniviri JCM 17471 Lactobacillus saniviri JCM 17471 = DSM 24301 PRJDB805 SAMD00000457 type strain 47.8% 2,420,749 67 3,308 ☆☆☆☆ Contig 95.76% 0.48%
GCA_001313205.1 Lactobacillus kimchicus JCM 15530 Lactobacillus kimchicus JCM 15530 PRJDB924 SAMD00016940 type strain 46.5% 2,595,250 30 4,155 ☆☆☆ Contig 88.86% 1.53%
GCA_001313225.1 Lactobacillus silagei JCM 19001 Lactobacillus silagei JCM 19001 PRJDB925 SAMD00016946 type strain 44.8% 2,650,200 47 3,600 ☆☆☆ Contig 92.92% 0.16%
GCA_001433745.1 Lactobacillus zeae DSM 20178 Lactobacillus zeae DSM 20178 = KCTC 3804 PRJNA222257 SAMN02369511 type strain 47.7% 3,121,340 55 2,961 ☆☆☆☆ Scaffold 99.35% 0.59%
GCA_001434365.1 Lactobacillus gastricus DSM 16045 Lactobacillus gastricus DSM 16045 PRJNA222257 SAMN02369419 type strain 41.6% 1,848,461 66 1,819 ☆☆☆☆ Scaffold 97.34% 0.78%
GCA_001434515.1 Lactobacillus hamsteri DSM 5661 Lactobacillus hamsteri DSM 5661 = JCM 6256 PRJNA222257 SAMN02369398 type strain 35.1% 1,837,804 93 1,738 ☆☆☆☆ Scaffold 98.39% 0.16%
GCA_001434785.1 Lactobacillus namurensis DSM 19117 Lactobacillus namurensis DSM 19117 PRJNA222257 SAMN02369490 type strain 52.0% 2,476,425 69 2,228 ☆☆☆☆ Scaffold 100.0% 0.16%
GCA_001434845.1 Lactobacillus hordei DSM 19519 Lactobacillus hordei DSM 19519 PRJNA222257 SAMN02369452 type strain 34.8% 2,298,009 137 2,241 ☆☆☆☆ Scaffold 98.39% 0.24%
GCA_001434985.1 Lactobacillus paralimentarius DSM 13238 Lactobacillus paralimentarius DSM 13238 = JCM 10415 PRJNA222257 SAMN02369493 type strain 35.1% 2,548,273 166 2,460 ☆☆☆☆ Scaffold 99.14% 2.34%
GCA_001435215.1 Lactobacillus plantarum subsp. argentoratensis DSM 16365 Lactobacillus plantarum subsp. argentoratensis DSM 16365 PRJNA222257 SAMN02369470 type strain 45.0% 3,186,310 210 2,939 ☆☆☆☆ Scaffold 99.35% 1.53%
GCA_001435315.1 Lactobacillus parabuchneri DSM 5707 Lactobacillus parabuchneri DSM 5707 = NBRC 107865 PRJNA222257 SAMN02369410 type strain 43.4% 2,566,098 50 2,373 ☆☆☆☆ Scaffold 98.71% 0.81%
GCA_001435375.1 Lactobacillus aviarius subsp. araffinosus DSM 20653 Lactobacillus aviarius subsp. araffinosus DSM 20653 PRJNA222257 SAMN02369423 type strain 38.1% 1,475,258 31 1,414 ☆☆☆☆ Scaffold 98.79% 0.59%
GCA_001435425.1 Lactobacillus coryniformis subsp. torquens DSM 20004 Lactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 PRJNA222257 SAMN02369375 type strain 42.9% 2,783,277 410 2,660 ☆☆☆ Scaffold 99.03% 5.15%
GCA_001435835.1 Lactobacillus concavus DSM 17758 Lactobacillus concavus DSM 17758 PRJNA222257 SAMN02369374 type strain 43.3% 1,898,108 96 1,757 ☆☆☆☆ Scaffold 99.35% 0.87%
GCA_001435955.1 Lactobacillus salivarius DSM 20555 Lactobacillus salivarius DSM 20555 = ATCC 11741 PRJNA222257 SAMN02369414 type strain 32.5% 1,982,601 62 1,920 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001435995.1 Lactobacillus ozensis DSM 23829 Lactobacillus ozensis DSM 23829 = JCM 17196 PRJNA222257 SAMN02369466 type strain 31.9% 1,479,955 36 1,434 ☆☆☆☆ Scaffold 97.37% 1.02%
GCA_001436015.1 Lactobacillus murinus DSM 20452 Lactobacillus murinus DSM 20452 = NBRC 14221 PRJNA222257 SAMN02369407 type strain 40.0% 2,183,163 176 2,040 ☆☆☆☆ Scaffold 99.14% 0.48%
GCA_001436095.1 Lactobacillus dextrinicus DSM 20335 Lactobacillus dextrinicus DSM 20335 PRJNA222257 SAMN02369443 type strain 38.0% 1,807,288 26 1,725 ☆☆☆☆ Scaffold 98.47% 1.66%
GCA_001436415.1 Lactobacillus graminis DSM 20719 Lactobacillus graminis DSM 20719 PRJNA222257 SAMN02369450 type strain 40.3% 1,834,154 72 1,738 ☆☆☆☆ Scaffold 98.39% 0.24%
GCA_001436805.1 Lactobacillus selangorensis ATCC BAA-66 Lactobacillus selangorensis PRJNA222257 SAMN02797769 type strain 46.3% 2,181,802 100 2,128 ☆☆☆☆ Scaffold 98.71% 1.95%
GCA_001437175.1 Lactobacillus fructivorans ATCC 27394 Lactobacillus fructivorans PRJNA222257 SAMN02797768 38.8% 1,416,533 12 1,467 ☆☆☆☆ Scaffold 97.26% 0.43%
GCA_000735255.1 Lactobacillus rhamnosus K32 Lactobacillus rhamnosus K32 PRJNA191611 SAMN02840977 46.7% 3,016,919 24 2,810 ☆☆☆☆ Contig 99.35% 0.29%
GCA_000155935.2 Lactobacillus gasseri MV-22 Lactobacillus gasseri MV-22 PRJNA31203 SAMN02463684 35.0% 1,930,436 2 2,178 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000195355.2 Lactobacillus helveticus MTCC 5463 Lactobacillus helveticus MTCC 5463 PRJNA62111 SAMN02470980 36.7% 2,048,546 593 2,402 ☆☆☆☆ Contig 98.12% 1.03%
GCA_000159395.1 Lactobacillus salivarius ATCC 11741 Lactobacillus salivarius DSM 20555 = ATCC 11741 PRJNA31503 SAMN00001483 type strain 32.6% 2,017,251 32 1,929 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000309665.1 Lactobacillus paracasei M36 Lactobacillus casei M36 PRJNA68469 SAMN02472000 46.3% 3,152,126 78 3,065 ☆☆☆☆ Contig 98.39% 0.88% The organism name was amended based on the ANI result.
GCA_000472345.1 Lactobacillus paracasei 12A Lactobacillus casei 12A PRJNA217366 SAMN02441122 46.3% 2,931,998 397 2,740 ☆☆☆☆ Contig 98.75% 4.19% The organism name was amended based on the ANI result.
GCA_000162335.1 Lactobacillus jensenii SJ-7A-US Lactobacillus jensenii SJ-7A-US PRJNA38515 SAMN02463744 34.2% 1,722,751 17 1,652 ☆☆☆☆ Scaffold 98.49% 0.24%
GCA_000615285.1 Lactobacillus kitasatonis JCM 1039 Lactobacillus kitasatonis DSM 16761 = JCM 1039 PRJDB640 SAMD00016339 type strain 37.5% 1,902,496 35 2,048 ☆☆☆☆ Contig 97.91% 0.16%
GCA_000148815.2 Lactobacillus plantarum subsp. plantarum ST-III Lactobacillus plantarum subsp. plantarum ST-III PRJNA52949 SAMN02603896 44.5% 3,307,936 2 3,081 ☆☆☆☆☆ Complete Genome 99.35% 1.53%
GCA_000615905.1 Lactobacillus nodensis JCM 14932 Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 PRJDB652 SAMD00015930 type strain 37.6% 2,678,542 52 2,853 ☆☆☆☆ Contig 98.92% 0.16%
GCA_000743895.1 Lactobacillus plantarum DmCS_001 Lactobacillus plantarum PRJNA252100 SAMN02849421 44.5% 3,194,687 83 3,000 ☆☆☆☆ Contig 99.03% 1.61%
GCA_000312405.1 Lactobacillus ingluviei Autruche 4 Lactobacillus ingluviei str. Autruche 4 PRJEB104 SAMEA2272482 50.9% 2,013,830 8 1,906 ☆☆☆☆ Scaffold 98.23% 0.78%
GCA_000409895.1 Lactobacillus paracasei subsp. paracasei Lpp226 Lactobacillus paracasei subsp. paracasei Lpp226 PRJNA178455 SAMN02469716 46.2% 3,009,478 131 2,941 ☆☆☆☆ Contig 99.03% 0.48%
GCA_000008065.1 Lactobacillus johnsonii NCC 533 Lactobacillus johnsonii NCC 533 PRJNA9638 SAMN02603676 34.6% 1,992,676 1 1,875 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000529385.1 Lactobacillus salivarius cp400 Lactobacillus salivarius cp400 PRJEB1226 SAMEA3138854 32.8% 2,156,694 88 2,085 ☆☆☆☆ Contig 98.66% 0.48%
GCA_000203855.3 Lactobacillus plantarum WCFS1 Lactobacillus plantarum WCFS1 PRJNA356 SAMEA3138345 44.4% 3,348,624 4 3,123 ☆☆☆☆☆ Complete Genome 99.35% 1.96%
GCA_000233755.1 Lactobacillus rhamnosus ATCC 8530 Lactobacillus rhamnosus ATCC 8530 PRJNA73355 SAMN02604241 46.8% 2,960,339 1 2,726 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000615095.1 Lactobacillus delbrueckii subsp. delbrueckii JCM 1012 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 PRJDB634 SAMD00016569 type strain 50.2% 1,725,089 150 1,957 ☆☆☆☆ Contig 97.72% 0.16%
GCA_000301115.1 Lactobacillus crispatus FB049-03 Lactobacillus crispatus FB049-03 PRJNA52107 SAMN02463886 37.0% 2,459,384 5 2,397 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000159715.1 Lactobacillus acidophilus ATCC 4796 Lactobacillus acidophilus ATCC 4796 PRJNA31477 SAMN00001471 34.6% 2,020,500 38 1,933 ☆☆☆☆ Scaffold 98.39% 0.16%
GCA_000409975.1 Lactobacillus paracasei subsp. paracasei Lpp123 Lactobacillus paracasei subsp. paracasei Lpp123 PRJNA178428 SAMN02469719 46.1% 2,815,036 1,107 2,795 ☆☆☆ Contig 89.95% 2.42%
GCA_000160835.1 Lactobacillus antri DSM 16041 Lactobacillus antri DSM 16041 PRJNA31479 SAMN00001477 type strain 51.1% 2,302,896 20 2,128 ☆☆☆☆ Scaffold 98.94% 0.24%
GCA_000338115.2 Lactobacillus plantarum ZJ316 Lactobacillus plantarum ZJ316 PRJNA186807 SAMN02604341 44.5% 3,299,755 4 3,133 ☆☆☆☆☆ Complete Genome 99.19% 1.53%
GCA_000317165.1 Lactobacillus saerimneri 30a Lactobacillus saerimneri 30a PRJNA177379 SAMN02469940 42.6% 1,633,986 22 1,549 ☆☆☆☆ Contig 98.71% 1.13%
GCA_000383435.1 Lactobacillus parabrevis RODS-DW Lactobacillus parabrevis ATCC 53295 PRJNA183044 SAMN02441638 49.0% 2,631,123 94 2,385 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000512295.1 Lactobacillus florum 8D Lactobacillus florum 8D PRJNA172731 SAMN02597458 41.5% 1,282,634 49 1,230 ☆☆☆☆ Contig 97.61% 0.06%
GCA_000410995.1 Lactobacillus reuteri I5007 Lactobacillus reuteri I5007 PRJNA206042 SAMN02603119 38.9% 2,093,275 7 2,032 ☆☆☆☆☆ Complete Genome 98.71% 0.81%
GCA_000178475.1 Lactobacillus amylolyticus DSM 11664 Lactobacillus amylolyticus DSM 11664 PRJNA34615 SAMN00262700 type strain 38.3% 1,540,806 73 1,567 ☆☆☆☆ Contig 99.03% 0.81%
GCA_000712565.2 Lactobacillus reuteri TMW1.656 Lactobacillus reuteri PRJNA248653 SAMN02869563 38.5% 1,949,539 17 1,993 ☆☆☆☆ Contig 99.3% 0.16%
GCA_000175055.1 Lactobacillus gasseri 202-4 Lactobacillus gasseri 202-4 PRJNA36379 SAMN00002206 34.9% 1,820,250 70 1,752 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000235805.2 Pediococcus acidilactici MA18/5M Pediococcus acidilactici MA18/5M PRJNA72773 SAMN02469945 42.1% 1,989,583 10 1,853 ☆☆☆☆ Contig 99.74% 0.93%
GCA_000765455.1 Lactobacillus helveticus M3 Lactobacillus helveticus PRJNA263142 SAMN03097255 36.8% 1,859,004 296 1,963 ☆☆☆☆ Contig 98.23% 0.16%
GCA_000237995.2 Pediococcus claussenii ATCC BAA-344 Pediococcus claussenii ATCC BAA-344 PRJNA42741 SAMN02604240 type strain 37.0% 1,978,793 9 1,892 ☆☆☆☆☆ Complete Genome 99.71% 0.71%
GCA_000226235.1 Lactobacillus rhamnosus CASL Lactobacillus rhamnosus CASL PRJNA72235 SAMN02471148 46.6% 2,860,691 188 2,676 ☆☆☆☆ Scaffold 99.25% 0.16%
GCA_000397165.1 Lactobacillus fermentum F-6 Lactobacillus fermentum F-6 PRJNA49143 SAMN02603935 51.7% 2,064,620 1 2,022 ☆☆☆☆☆ Complete Genome 98.47% 0.24%
GCA_000160875.1 Lactobacillus iners DSM 13335 Lactobacillus iners DSM 13335 PRJNA31491 SAMN00139432 type strain 32.5% 1,277,649 12 1,191 ☆☆☆☆ Scaffold 99.03% 0.0%
GCA_000194115.1 Lactobacillus amylovorus GRL1118 Lactobacillus amylovorus GRL1118 PRJNA42079 SAMN02603307 38.0% 1,977,087 3 1,957 ☆☆☆☆☆ Complete Genome 98.92% 0.16%
GCA_000425905.1 Lactobacillus psittaci DSM 15354 Lactobacillus psittaci DSM 15354 PRJNA188921 SAMN02440851 type strain 35.7% 1,542,852 23 1,340 ☆☆☆☆ Scaffold 98.06% 0.16%
GCA_000439915.1 Lactobacillus gasseri 2016 Lactobacillus gasseri 2016 PRJNA208361 SAMN02470136 35.3% 1,879,515 29 1,812 ☆☆☆☆ Contig 99.73% 0.16%
GCA_000493555.1 Lactobacillus helveticus CIRM-BIA 104 Lactobacillus helveticus CIRM-BIA 104 PRJEB1540 SAMEA2272495 36.5% 2,069,026 171 2,207 ☆☆☆☆ Scaffold 98.55% 0.29%
GCA_000168255.1 Lactobacillus reuteri 100-23 Lactobacillus reuteri 100-23 PRJNA13431 SAMN00623049 38.7% 2,305,557 2 2,170 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000179975.1 Lactobacillus iners LEAF 2062A-h1 Lactobacillus iners LEAF 2062A-h1 PRJNA52045 SAMN00115042 32.6% 1,303,868 24 1,259 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000283135.1 Lactobacillus gasseri CECT 5714 Lactobacillus gasseri CECT 5714 PRJNA163367 SAMN02471361 35.0% 1,907,790 85 1,873 ☆☆☆☆ Contig 99.35% 2.31%
GCA_000789175.1 Lactobacillus mucosae DPC 6426 Lactobacillus mucosae PRJNA265168 SAMN03145820 46.7% 2,079,103 72 1,964 ☆☆☆☆ Contig 98.39% 0.48%
GCA_000814885.1 Lactobacillus gasseri 130918 Lactobacillus gasseri 130918 PRJNA219715 SAMN03274462 34.9% 1,955,817 2 1,860 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000830375.1 Lactobacillus kunkeei AR114 Lactobacillus kunkeei PRJNA253911 SAMN02981005 36.9% 1,551,609 21 1,394 ☆☆☆☆ Contig 97.58% 1.02%
GCA_000830535.1 Lactobacillus plantarum 90sk Lactobacillus plantarum PRJNA271052 SAMN03272560 44.3% 3,371,458 47 3,237 ☆☆☆☆ Contig 99.03% 1.53%
GCA_000875905.1 Lactobacillus brevis 15f Lactobacillus brevis PRJNA269010 SAMN03247579 45.9% 2,435,429 99 2,345 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000934805.1 Lactobacillus delbrueckii subsp. bulgaricus CRL871 Lactobacillus delbrueckii subsp. bulgaricus PRJNA271062 SAMN03272671 49.1% 2,060,781 536 2,496 ☆☆☆☆ Contig 96.75% 3.93%
GCA_000958485.1 Lactobacillus paracasei NRIC1981 Lactobacillus paracasei NRIC 1981 PRJDB1561 SAMD00000558 46.2% 3,178,642 460 2,937 ☆☆☆☆ Contig 99.35% 0.61%
GCA_000958525.1 Lactobacillus paracasei NRIC0644 Lactobacillus paracasei NRIC 0644 PRJDB1559 SAMD00000556 46.2% 3,199,833 900 2,863 ☆☆☆☆ Contig 100.0% 3.78%
GCA_001010995.1 Lactobacillus brevis 47f Lactobacillus brevis PRJNA280953 SAMN03470252 45.5% 2,621,559 138 2,674 ☆☆☆☆ Contig 99.03% 0.24%
GCA_001040725.1 Lactobacillus mucosae Marseille Lactobacillus mucosae LM1 PRJEB9398 SAMEA3393057 46.2% 2,369,669 12 2,196 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001042405.1 Lactobacillus acetotolerans NBRC 13120 Lactobacillus acetotolerans PRJDB3543 SAMD00026530 36.7% 1,704,859 1 1,671 ☆☆☆☆☆ Complete Genome 98.71% 1.22%
GCA_001044005.1 Lactobacillus rhamnosus Lr140 Lactobacillus rhamnosus PRJNA253894 SAMN03196660 46.5% 2,594,811 1,423 2,507 ☆☆☆ Contig 84.63% 1.53%
GCA_001044405.1 Lactobacillus rhamnosus 40f Lactobacillus rhamnosus PRJNA287246 SAMN03766173 46.6% 3,127,473 81 3,050 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001046795.1 Lactobacillus farciminis CNCM-I-3699-S Lactobacillus farciminis PRJNA284512 SAMN03703113 35.6% 2,465,324 3 2,367 ☆☆☆☆☆ Chromosome 99.14% 1.34% Shows 90.6% ANI value against L. futsaii, 90.5% ANI values against L. farciminis.
GCA_001062665.1 Lactobacillus paracasei 1316.rep1_LPAR Lactobacillus paracasei PRJNA267549 SAMN03197293 46.5% 2,856,086 170 2,724 ☆☆☆☆ Contig 99.27% 0.48%
GCA_001062885.1 Lactobacillus rhamnosus 186_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197377 46.7% 3,045,143 96 2,807 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001064515.1 Lactobacillus rhamnosus 319_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197509 46.7% 2,899,444 32 2,693 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001066565.1 Lactobacillus paracasei 844_LCAS Lactobacillus casei PRJNA267549 SAMN03198052 46.4% 2,788,830 236 2,665 ☆☆☆☆ Contig 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_001191565.1 Lactobacillus paracasei CAUH35 Lactobacillus paracasei PRJNA290442 SAMN03892742 46.3% 2,973,347 5 2,946 ☆☆☆☆☆ Complete Genome 99.35% 0.48%
GCA_001244395.1 Lactobacillus paracasei L9 Lactobacillus paracasei PRJNA289435 SAMN03853751 46.3% 3,076,437 1 2,943 ☆☆☆☆☆ Complete Genome 99.35% 0.48%
GCA_001281215.1 Lactobacillus kunkeei LAla Lactobacillus kunkeei PRJNA270966 SAMN03275717 37.0% 1,569,644 47 1,404 ☆☆☆☆ Contig 97.9% 0.81%
GCA_001307325.1 Lactobacillus plantarum WJL Lactobacillus plantarum WJL PRJNA294130 SAMN04017315 44.2% 3,503,067 13 3,341 ☆☆☆☆ Contig 99.35% 1.53%
GCA_001311055.1 Lactobacillus sharpeae JCM 1186 Lactobacillus sharpeae JCM 1186 = DSM 20505 PRJDB758 SAMD00000421 type strain 53.3% 2,486,011 64 2,905 ☆☆☆☆ Contig 95.2% 1.53%
GCA_001311195.1 Lactobacillus camelliae JCM 13995 Lactobacillus camelliae DSM 22697 = JCM 13995 PRJDB765 SAMD00000439 type strain 55.4% 2,542,116 161 3,298 ☆☆☆ Contig 94.34% 1.45%
GCA_001311665.1 Lactobacillus amylophilus JCM 1125 Lactobacillus amylophilus DSM 20533 = JCM 1125 PRJDB799 SAMD00000418 type strain 43.5% 1,552,612 31 2,264 ☆☆☆ Contig 91.82% 2.27%
GCA_001368775.1 Lactobacillus plantarum 80 Lactobacillus plantarum PRJEB5195 SAMEA3158485 44.4% 3,224,773 67 3,045 ☆☆☆☆ Contig 99.35% 1.53%
GCA_001433735.1 Lactobacillus paracasei DSM 20011 Lactobacillus casei DSM 20011 = JCM 1134 PRJNA222257 SAMN02369372 type strain 46.4% 2,820,682 139 2,704 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_001433895.1 Lactobacillus acidophilus DSM 20079 Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 PRJNA222257 SAMN02369388 type strain 34.6% 1,954,043 30 1,877 ☆☆☆☆ Scaffold 99.03% 0.22%
GCA_001434695.1 Lactobacillus algidus DSM 15638 Lactobacillus algidus DSM 15638 PRJNA222257 SAMN02369425 type strain 36.0% 1,590,323 28 1,531 ☆☆☆☆ Contig 97.61% 0.81%
GCA_001434745.1 Lactobacillus alimentarius DSM 20249 Lactobacillus alimentarius DSM 20249 PRJNA222257 SAMN02369426 type strain 35.4% 2,336,325 46 2,233 ☆☆☆☆ Scaffold 99.14% 1.45%
GCA_001434935.1 Lactobacillus uvarum DSM 19971 Lactobacillus uvarum DSM 19971 PRJNA222257 SAMN02369480 type strain 36.9% 2,686,405 164 2,521 ☆☆☆☆ Scaffold 99.35% 1.45%
GCA_001435015.1 Lactobacillus iners DSM 13335 Lactobacillus iners DSM 13335 PRJNA222257 SAMN02369401 type strain 32.5% 1,267,657 58 1,189 ☆☆☆☆ Contig 99.03% 0.0%
GCA_001435065.1 Lactobacillus fuchuensis DSM 14340 Lactobacillus fuchuensis DSM 14340 = JCM 11249 PRJNA222257 SAMN02369428 type strain 41.8% 2,122,254 76 2,027 ☆☆☆☆ Scaffold 97.94% 2.1%
GCA_001435195.1 Lactobacillus satsumensis DSM 16230 Lactobacillus satsumensis DSM 16230 = JCM 12392 PRJNA222257 SAMN02369510 type strain 39.9% 2,639,652 55 2,438 ☆☆☆☆ Scaffold 99.35% 1.02%
GCA_001435585.1 Lactobacillus perolens DSM 12744 Lactobacillus perolens DSM 12744 PRJNA222257 SAMN02369469 type strain 49.1% 3,309,179 101 3,139 ☆☆☆☆ Contig 98.71% 1.96%
GCA_001435915.1 Lactobacillus vaginalis DSM 5837 Lactobacillus vaginalis DSM 5837 = ATCC 49540 PRJNA222257 SAMN02369417 type strain 40.5% 1,787,468 149 1,738 ☆☆☆☆ Scaffold 99.35% 1.13%
GCA_001436115.1 Lactobacillus brantae DSM 23927 Lactobacillus brantae DSM 23927 PRJNA222257 SAMN02369393 type strain 47.5% 1,929,842 12 1,900 ☆☆☆☆ Contig 99.19% 0.16%
GCA_001436125.1 Lactobacillus hominis DSM 23910 Lactobacillus hominis DSM 23910 = CRBIP 24.179 PRJNA222257 SAMN02369400 type strain 35.2% 1,926,334 47 1,874 ☆☆☆☆ Scaffold 96.65% 0.16%
GCA_001436395.1 Lactobacillus malefermentans DSM 5705 Lactobacillus malefermentans DSM 5705 = KCTC 3548 PRJNA222257 SAMN02369504 type strain 41.0% 2,054,664 152 2,011 ☆☆☆☆ Contig 98.71% 0.48%
GCA_001436505.1 Lactobacillus rennini DSM 20253 Lactobacillus rennini DSM 20253 PRJNA222257 SAMN02369383 type strain 40.7% 2,269,330 106 2,217 ☆☆☆☆ Scaffold 99.14% 3.23%
GCA_001436735.1 Lactobacillus cacaonum DSM 21116 Lactobacillus cacaonum DSM 21116 PRJNA222257 SAMN02369439 type strain 33.9% 1,919,106 17 1,824 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001436835.1 Lactobacillus fermentum DSM 20055 Lactobacillus fermentum PRJNA222257 SAMN02797777 52.4% 1,900,053 102 1,842 ☆☆☆☆ Scaffold 98.4% 0.16%
GCA_000191165.1 Lactobacillus delbrueckii subsp. bulgaricus 2038 Lactobacillus delbrueckii subsp. bulgaricus 2038 PRJNA16120 SAMN02603124 49.7% 1,872,918 1 1,923 ☆☆☆☆☆ Complete Genome 99.03% 1.45%
GCA_001311095.1 Lactobacillus paralimentarius JCM 10707 Lactobacillus paralimentarius DSM 13961 = JCM 10707 PRJDB760 SAMD00000409 35.1% 2,742,293 30 2,877 ☆☆☆☆ Contig 97.46% 4.22%
GCA_000184535.1 Lactobacillus farciminis KCTC 3681 Lactobacillus farciminis KCTC 3681 = DSM 20184 PRJNA61183 SAMN02470200 36.4% 2,498,309 5 2,466 ☆☆☆☆ Scaffold 99.3% 3.28%
GCA_000247775.2 Lactobacillus gastricus PS3 Lactobacillus gastricus PS3 PRJNA82791 SAMN02471359 41.8% 1,904,872 80 1,911 ☆☆☆☆ Contig 96.85% 0.78%
GCA_000146325.1 Pediococcus acidilactici DSM 20284 Pediococcus acidilactici DSM 20284 PRJNA50527 SAMN00116807 type strain 42.1% 1,942,827 4 1,813 ☆☆☆☆ Scaffold 99.76% 0.93%
GCA_001434585.1 Lactobacillus crustorum JCM 15951 Lactobacillus crustorum JCM 15951 PRJNA222257 SAMN02369486 type strain 35.0% 2,219,511 101 2,158 ☆☆☆☆ Contig 99.14% 1.77%
GCA_001066665.1 Lactobacillus salivarius 866_LSAL Lactobacillus salivarius PRJNA267549 SAMN03198074 32.7% 1,966,494 117 1,911 ☆☆☆☆ Contig 99.03% 0.48%
GCA_000260775.1 Lactobacillus malefermentans KCTC 3548 Lactobacillus malefermentans DSM 5705 = KCTC 3548 PRJDA68081 41.1% 2,002,505 162 1,948 ☆☆☆☆ Contig 98.71% 0.48%
GCA_000741865.1 Lactobacillus kunkeei MP2 Lactobacillus kunkeei PRJNA257367 SAMN02950967 36.8% 1,581,395 44 1,428 ☆☆☆☆ Contig 97.9% 1.45%
GCA_001293735.1 Lactobacillus gorillae KZ01 Lactobacillus gorillae PRJDB4156 SAMD00038621 type strain 48.1% 1,641,621 63 1,568 ☆☆☆☆ Contig 98.79% 0.16%
GCA_000143645.1 Lactobacillus gasseri JV-V03 Lactobacillus gasseri JV-V03 PRJNA31487 SAMN00001501 34.6% 2,011,855 8 1,952 ☆☆☆☆ Scaffold 99.19% 0.16%
GCA_000143435.1 Lactobacillus salivarius CECT 5713 Lactobacillus salivarius CECT 5713 PRJNA43535 SAMN02604101 33.0% 2,136,138 4 2,181 ☆☆☆☆☆ Complete Genome 99.03% 0.48%
GCA_000179375.1 Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 PRJNA49619 SAMN00017036 50.0% 1,977,342 140 1,838 ☆☆☆☆ Contig 99.03% 0.48% Shows 98.6% ANI value against Lactobacillus delbrueckii subsp. sunkii.
GCA_000582665.1 Lactobacillus paracasei N1115 Lactobacillus paracasei N1115 PRJNA234304 SAMN03081525 46.5% 3,064,279 5 3,005 ☆☆☆☆☆ Complete Genome 99.35% 0.48%
GCA_001294765.1 Pediococcus acidilactici K3 Pediococcus acidilactici PRJNA293918 SAMN04011952 42.1% 1,991,399 67 2,126 ☆☆☆☆ Contig 95.73% 0.98%
GCA_000604365.1 Lactobacillus plantarum 19L3 Lactobacillus plantarum 19L3 PRJNA218842 SAMN02353165 44.4% 3,289,268 241 3,168 ☆☆☆☆ Contig 98.39% 2.98%
GCA_000160175.1 Lactobacillus rhamnosus LMS2-1 Lactobacillus rhamnosus LMS2-1 PRJNA31497 SAMN00001479 46.5% 3,159,402 55 2,915 ☆☆☆☆ Scaffold 99.25% 0.16%
GCA_000687335.1 Lactobacillus kunkeei EFB6 Lactobacillus kunkeei EFB6 PRJNA227106 SAMN02767920 36.9% 1,566,851 55 1,423 ☆☆☆☆ Contig 97.58% 3.06%
GCA_000309705.1 Lactobacillus paracasei UCD174 Lactobacillus casei UCD174 PRJNA68473 SAMN02472002 46.4% 3,071,147 116 3,094 ☆☆☆☆ Contig 99.25% 0.81% The organism name was amended based on the ANI result.
GCA_001311355.1 Lactobacillus parafarraginis JCM 14109 Lactobacillus parafarraginis DSM 18390 = JCM 14109 PRJDB773 SAMD00000440 type strain 45.2% 3,101,821 236 3,543 ☆☆☆ Contig 93.91% 0.91%
GCA_000159615.1 Lactobacillus reuteri CF48-3A Lactobacillus reuteri CF48-3A PRJNA31553 SAMN00001503 38.7% 2,107,903 92 2,009 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_000015385.1 Lactobacillus helveticus DPC 4571 Lactobacillus helveticus DPC 4571 PRJNA17811 SAMN02603893 37.1% 2,080,931 1 2,199 ☆☆☆☆☆ Complete Genome 98.55% 0.16%
GCA_001044075.1 Lactobacillus rhamnosus Lr138 Lactobacillus rhamnosus PRJNA253894 SAMN03196654 46.7% 2,737,707 533 2,617 ☆☆☆☆ Contig 96.55% 1.92%
GCA_000510825.1 Lactobacillus paracasei A2-362 Lactobacillus casei A2-362 PRJNA218804 SAMN02597184 46.2% 3,186,676 162 3,084 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000149065.2 Lactobacillus iners LactinV 11V1-d Lactobacillus iners LactinV 11V1-d PRJNA52039 SAMN00115040 32.6% 1,310,250 27 1,348 ☆☆☆☆ Contig 98.6% 0.16%
GCA_001311155.1 Lactobacillus manihotivorans JCM 12514 Lactobacillus manihotivorans DSM 13343 = JCM 12514 PRJDB763 SAMD00000432 type strain 47.6% 3,200,956 307 4,842 ☆☆☆ Contig 90.45% 1.47%
GCA_001010245.1 Lactobacillus fermentum 90 TC-4 Lactobacillus fermentum PRJNA279953 SAMN03452288 51.9% 1,822,484 93 1,832 ☆☆☆☆ Contig 96.29% 0.16%
GCA_000814735.1 Lactobacillus fructivorans DmCS_002 Lactobacillus fructivorans PRJNA252104 SAMN02849426 39.2% 1,332,231 25 1,276 ☆☆☆☆ Contig 98.06% 0.43%
GCA_001311255.1 Lactobacillus nasuensis JCM 17158 Lactobacillus nasuensis JCM 17158 PRJDB768 SAMD00000455 type strain 56.9% 2,248,882 184 3,094 ☆☆☆ Contig 93.46% 1.21%
GCA_000182835.1 Lactobacillus delbrueckii subsp. bulgaricus ND02 Lactobacillus delbrueckii subsp. bulgaricus ND02 PRJNA49147 SAMN02603937 49.5% 2,131,976 2 2,039 ☆☆☆☆☆ Complete Genome 99.03% 0.0% Shows 98.7% ANI value against Lactobacillus delbrueckii subsp. lactis.
GCA_001066695.1 Lactobacillus casei 867_LCAS Lactobacillus casei PRJNA267549 SAMN03198075 47.9% 3,092,420 200 2,856 ☆☆☆☆ Contig 99.35% 0.99%
GCA_000016825.1 Lactobacillus reuteri DSM 20016 Lactobacillus reuteri DSM 20016 PRJNA15766 SAMN02598351 type strain 38.9% 1,999,618 1 1,983 ☆☆☆☆☆ Complete Genome 98.06% 0.81%
GCA_001311765.1 Lactobacillus equicursoris JCM 14600 Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 PRJDB804 SAMD00000443 type strain 47.8% 2,025,929 114 2,909 ☆☆☆☆ Contig 95.68% 0.41%
GCA_000833415.1 Lactobacillus brevis TMW 1.6 Lactobacillus brevis PRJNA264952 SAMN03144670 46.0% 2,520,318 46 2,389 ☆☆☆☆ Scaffold 99.03% 0.48%
GCA_000161935.1 Lactobacillus coleohominis 101-4-CHN Lactobacillus coleohominis 101-4-CHN PRJNA37949 SAMN02463725 41.3% 1,725,829 12 1,709 ☆☆☆☆ Scaffold 99.41% 0.81%
GCA_000179995.1 Lactobacillus iners LEAF 3008A-a Lactobacillus iners LEAF 3008A-a PRJNA52047 SAMN00115043 32.5% 1,273,041 25 1,204 ☆☆☆☆ Contig 98.39% 0.16%
GCA_001434615.1 Lactobacillus reuteri DSM 20016 Lactobacillus reuteri DSM 20016 PRJNA222257 SAMN02369412 type strain 38.6% 1,935,860 150 1,908 ☆☆☆☆ Scaffold 98.71% 0.81%
GCA_000565485.1 Lactobacillus fabifermentans T30PCM01 Lactobacillus fabifermentans T30PCM01 PRJNA219157 SAMN02356208 44.9% 3,580,413 94 3,376 ☆☆☆☆ Scaffold 99.03% 1.42%
GCA_000758145.1 Lactobacillus paraplantarum L-ZS9 Lactobacillus paraplantarum PRJNA253765 SAMN02893814 43.9% 3,119,721 40 2,900 ☆☆☆☆ Scaffold 99.35% 1.85%
GCA_000162255.1 Lactobacillus crispatus 125-2-CHN Lactobacillus crispatus 125-2-CHN PRJNA38361 SAMN02463740 36.7% 2,305,246 30 2,120 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_001435055.1 Lactobacillus coleohominis DSM 14060 Lactobacillus coleohominis DSM 14060 PRJNA222257 SAMN02369394 type strain 40.8% 1,716,238 964 1,809 ☆☆☆ Scaffold 86.26% 6.7%
GCA_000784395.1 Lactobacillus rhamnosus L35 Lactobacillus rhamnosus L35 PRJNA217082 SAMN02324556 46.8% 2,937,403 51 2,748 ☆☆☆☆ Contig 99.35% 0.48%
GCA_001312845.1 Lactobacillus collinoides JCM 1123 Lactobacillus collinoides DSM 20515 = JCM 1123 PRJDB897 SAMD00016806 type strain 46.1% 3,562,239 114 4,496 ☆☆☆ Contig 92.76% 1.13%
GCA_000410495.1 Lactobacillus paracasei subsp. paracasei Lpp70 Lactobacillus paracasei subsp. paracasei Lpp70 PRJNA178425 SAMN02641493 46.5% 2,723,514 474 2,602 ☆☆☆☆ Contig 98.69% 0.7%
GCA_001008755.1 Lactobacillus ruminis ATCC 27780 Lactobacillus ruminis PRJNA239220 SAMN02650410 type strain 43.4% 2,024,063 110 1,898 ☆☆☆☆ Contig 98.71% 0.48%
GCA_000400585.1 Lactobacillus paracasei LcA Lactobacillus casei LcA PRJNA195542 SAMN01994728 46.3% 3,128,276 2 3,058 ☆☆☆☆☆ Chromosome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000417005.1 Lactobacillus fermentum FTDC8312 Lactobacillus fermentum FTDC8312 PRJNA205894 SAMN02469912 52.0% 1,966,551 129 1,947 ☆☆☆☆ Scaffold 98.63% 0.16%
GCA_000708635.1 Pediococcus pentosaceus CGMCC 7049 Pediococcus pentosaceus CGMCC 7049 PRJNA237570 SAMN02639794 37.3% 1,751,049 8 1,716 ☆☆☆☆ Contig 98.98% 0.57%
GCA_001062955.1 Lactobacillus rhamnosus 214_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197407 46.6% 2,962,195 268 2,737 ☆☆☆☆ Contig 100.0% 0.16%
GCA_001311445.1 Lactobacillus rapi JCM 15042 Lactobacillus rapi DSM 19907 = JCM 15042 PRJDB777 SAMD00000448 type strain 42.9% 2,844,001 105 3,700 ☆☆☆ Contig 94.5% 0.16%
GCA_001066715.1 Lactobacillus rhamnosus 870_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198077 46.6% 3,032,125 248 2,800 ☆☆☆☆ Contig 99.35% 0.81%
GCA_000210515.1 Lactobacillus fermentum CECT 5716 Lactobacillus fermentum CECT 5716 PRJNA43533 SAMN02604100 51.5% 2,100,449 1 2,335 ☆☆☆☆☆ Complete Genome 96.12% 0.24%
GCA_000155915.2 Lactobacillus jensenii 1153 Lactobacillus jensenii 1153 PRJNA31205 SAMN02463685 34.5% 1,746,219 1 1,892 ☆☆☆☆ Scaffold 96.88% 0.46%
GCA_000162315.1 Lactobacillus crispatus MV-3A-US Lactobacillus crispatus MV-3A-US PRJNA38513 SAMN02463743 36.7% 2,437,083 76 2,402 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_001433825.1 Lactobacillus kunkeei DSM 12361 Lactobacillus kunkeei DSM 12361 = ATCC 700308 PRJNA222257 SAMN02369503 type strain 36.4% 1,513,897 23 1,356 ☆☆☆☆ Scaffold 97.9% 0.81%
GCA_001312065.1 Lactobacillus senioris JCM 17472 Lactobacillus senioris DSM 24302 = JCM 17472 PRJDB827 SAMD00000539 type strain 39.3% 1,572,417 20 2,223 ☆☆☆☆ Contig 96.45% 1.53%
GCA_000159475.2 Lactobacillus reuteri MM4-1A Lactobacillus reuteri MM4-1A PRJNA31511 SAMN00001504 38.9% 2,067,914 7 2,062 ☆☆☆☆ Contig 98.71% 0.81%
GCA_001281225.1 Lactobacillus kunkeei LAan Lactobacillus kunkeei PRJNA270961 SAMN03275713 37.1% 1,554,001 24 1,404 ☆☆☆☆ Scaffold 97.58% 0.91%
GCA_001434195.1 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 PRJNA222257 SAMN02369454 type strain 37.5% 2,085,781 138 2,087 ☆☆☆☆ Scaffold 99.03% 0.38%
GCA_001434815.1 Lactobacillus equicursoris DSM 19284 Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 PRJNA222257 SAMN02369379 type strain 47.7% 2,052,598 182 1,873 ☆☆☆☆ Scaffold 98.92% 0.7%
GCA_001434655.1 Lactobacillus hilgardii DSM 20176 Lactobacillus hilgardii DSM 20176 = ATCC 8290 PRJNA222257 SAMN02369502 type strain 39.6% 2,603,106 125 2,530 ☆☆☆☆ Contig 99.35% 1.21%
GCA_000409935.1 Lactobacillus paracasei subsp. paracasei Lpp120 Lactobacillus paracasei subsp. paracasei Lpp120 PRJNA178452 SAMN02469723 46.5% 2,801,291 201 2,686 ☆☆☆☆ Contig 99.03% 1.13%
GCA_000392485.2 Lactobacillus plantarum subsp. plantarum P-8 Lactobacillus plantarum subsp. plantarum P-8 PRJNA49145 SAMN02603936 44.6% 3,246,630 8 3,094 ☆☆☆☆☆ Complete Genome 99.35% 2.18%
GCA_000236455.1 Lactobacillus reuteri ATCC 53608 Lactobacillus reuteri ATCC 53608 PRJEA63411 SAMEA2272605 38.6% 2,021,379 45 1,944 ☆☆☆☆ Scaffold 98.71% 0.91%
GCA_001006945.1 Lactobacillus amylovorus unkown Lactobacillus sp. PRJEB7876 SAMEA3146092 38.0% 1,879,641 41 1,852 ☆☆☆☆ Contig 98.92% 1.13% The organism name was inferred from ANI result. (97.0% against L. amylovorus)
GCA_000238835.1 Lactobacillus parafarraginis F0439 Lactobacillus parafarraginis F0439 PRJNA49691 SAMN02299435 45.6% 2,854,910 165 2,878 ☆☆☆☆ Scaffold 98.87% 0.35%
GCA_000194765.1 Lactobacillus paracasei BD-II Lactobacillus casei BD-II PRJNA64431 SAMN02603876 46.3% 3,127,288 2 3,066 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000615445.1 Lactobacillus hamsteri JCM 6256 Lactobacillus hamsteri DSM 5661 = JCM 6256 PRJDB644 SAMD00003823 type strain 35.1% 1,826,493 81 1,817 ☆☆☆☆ Contig 97.42% 0.16%
GCA_001311215.1 Lactobacillus florum JCM 16035 Lactobacillus florum DSM 22689 = JCM 16035 PRJDB766 SAMD00000451 type strain 41.1% 1,355,137 25 1,972 ☆☆☆ Contig 87.98% 0.48%
GCA_001063855.1 Lactobacillus salivarius 609_LSAL Lactobacillus salivarius PRJNA267549 SAMN03197809 32.7% 1,838,682 111 1,774 ☆☆☆☆ Contig 99.03% 0.61%
GCA_001010185.1 Lactobacillus fermentum 39 Lactobacillus fermentum PRJNA279953 SAMN03452287 51.6% 1,829,655 55 1,816 ☆☆☆ Contig 90.62% 0.24%
GCA_001063505.1 Lactobacillus gasseri 497_LGAS Lactobacillus gasseri PRJNA267549 SAMN03197689 34.8% 2,095,509 47 1,992 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000364205.1 Lactobacillus murinus ASF361 Lactobacillus murinus ASF361 PRJNA176001 SAMN01731005 40.0% 2,171,577 11 2,052 ☆☆☆☆ Scaffold 99.14% 0.81%
GCA_001063655.1 Lactobacillus rhamnosus 526_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197721 46.6% 3,159,851 100 2,943 ☆☆☆☆ Contig 98.71% 0.16%
GCA_001411765.1 Pediococcus pentosaceus wikim20 Pediococcus pentosaceus PRJNA260124 SAMN04017317 37.1% 1,808,453 17 1,732 ☆☆☆☆ Contig 99.66% 0.75%
GCA_000410455.1 Lactobacillus paracasei subsp. paracasei Lpp43 Lactobacillus paracasei subsp. paracasei Lpp43 PRJNA178440 SAMN02469725 46.1% 3,116,282 205 3,026 ☆☆☆☆ Contig 98.33% 0.54%
GCA_000159315.1 Lactobacillus hilgardii ATCC 8290 Lactobacillus hilgardii DSM 20176 = ATCC 8290 PRJNA31489 SAMN00001467 type strain 39.6% 2,721,039 113 2,548 ☆☆☆☆ Scaffold 99.14% 1.21%
GCA_001435155.1 Lactobacillus pantheris DSM 15945 Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 PRJNA222257 SAMN02369409 type strain 52.9% 2,541,966 62 2,294 ☆☆☆☆ Scaffold 97.74% 1.77%
GCA_001435275.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 PRJNA222257 SAMN02369453 type strain 37.2% 2,257,219 133 2,311 ☆☆☆☆ Scaffold 98.87% 0.56%
GCA_001435345.1 Lactobacillus pontis DSM 8475 Lactobacillus pontis DSM 8475 PRJNA222257 SAMN02369494 type strain 53.4% 1,667,627 68 1,615 ☆☆☆☆ Scaffold 98.28% 0.16%
GCA_001435395.1 Lactobacillus vini DSM 20605 Lactobacillus vini DSM 20605 PRJNA222257 SAMN02369481 type strain 37.5% 2,238,031 269 2,111 ☆☆☆☆ Scaffold 98.39% 1.02%
GCA_001435405.1 Lactobacillus rhamnosus DSM 20021 Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 PRJNA222257 SAMN02369512 type strain 46.7% 2,949,099 38 2,721 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001435495.1 Lactobacillus curvatus DSM 20019 Lactobacillus curvatus JCM 1096 = DSM 20019 PRJNA222257 SAMN02369367 type strain 42.0% 1,815,830 250 1,815 ☆☆☆☆ Scaffold 98.71% 1.23%
GCA_001435525.1 Lactobacillus koreensis JCM 16448 Lactobacillus koreensis JCM 16448 PRJNA222257 SAMN02369459 type strain 49.2% 2,957,112 123 2,676 ☆☆☆☆ Scaffold 99.35% 0.89%
GCA_001435775.1 Lactobacillus ingluviei DSM 15946 Lactobacillus ingluviei DSM 15946 PRJNA222257 SAMN02369402 type strain 49.9% 2,151,571 88 2,095 ☆☆☆☆ Scaffold 98.23% 0.54%
GCA_001436025.1 Lactobacillus mucosae DSM 13345 Lactobacillus mucosae DSM 13345 PRJNA222257 SAMN02369406 type strain 46.4% 2,254,291 91 2,014 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001436375.1 Lactobacillus composti DSM 18527 Lactobacillus composti DSM 18527 = JCM 14202 PRJNA222257 SAMN02369442 type strain 43.9% 3,467,402 88 3,307 ☆☆☆☆ Scaffold 99.35% 3.28%
GCA_001436385.1 Lactobacillus paracasei subsp. paracasei DSM 5622 Lactobacillus paracasei subsp. paracasei DSM 5622 PRJNA222257 SAMN02369433 type strain 46.5% 2,881,963 170 2,776 ☆☆☆☆ Contig 99.35% 0.48%
GCA_001436485.1 Lactobacillus paracasei subsp. tolerans DSM 20258 Lactobacillus paracasei subsp. tolerans DSM 20258 PRJNA222257 SAMN02369371 type strain 46.4% 2,383,240 389 2,339 ☆☆☆☆ Scaffold 99.35% 0.48%
GCA_001436945.1 Lactobacillus acidipiscis DSM 15353 Lactobacillus acidipiscis PRJNA222257 SAMN02797774 39.1% 2,318,091 297 2,148 ☆☆☆☆ Scaffold 98.17% 1.34%
GCA_001437195.1 Lactobacillus delbrueckii subsp. bulgaricus DSM 20081 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 PRJNA222257 SAMN02797778 type strain 49.9% 1,758,527 80 1,785 ☆☆☆☆ Scaffold 98.17% 0.81%
GCA_001437285.1 Pediococcus pentosaceus DSM 20336 Pediococcus pentosaceus PRJNA222257 SAMN02797817 type strain 37.3% 1,739,506 28 1,676 ☆☆☆☆ Contig 98.98% 1.79%
GCA_001437485.1 Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 PRJNA222257 SAMN02797789 type strain 50.3% 1,749,240 134 1,680 ☆☆☆☆ Scaffold 98.87% 0.16%
GCA_001437505.1 Lactobacillus hokkaidonensis DSM 26202 Lactobacillus hokkaidonensis PRJNA222257 SAMN02797790 type strain 38.1% 2,329,330 84 2,265 ☆☆☆☆ Scaffold 99.3% 2.5%
GCA_001438785.1 Lactobacillus ceti DSM 22408 Lactobacillus ceti DSM 22408 PRJNA222257 SAMN02797784 type strain 33.7% 1,397,811 26 1,273 ☆☆☆☆ Scaffold 97.74% 1.24%
GCA_001443645.1 Lactobacillus paraplantarum L-ZS9 Lactobacillus paraplantarum PRJNA299444 SAMN02893814 44.0% 3,139,729 1 2,942 ☆☆☆☆☆ Complete Genome 99.35% 1.85%
GCA_000466785.3 Lactobacillus fermentum 3872 Lactobacillus fermentum 3872 PRJNA213970 SAMN02314197 50.6% 2,330,492 2 2,325 ☆☆☆☆☆ Complete Genome 98.79% 0.16%
GCA_000699985.1 Lactobacillus rhamnosus 51B Lactobacillus rhamnosus 51B PRJNA222883 SAMN02776192 46.6% 2,952,580 21 2,773 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001435505.1 Lactobacillus futsaii JCM 17355 Lactobacillus futsaii JCM 17355 PRJNA222257 SAMN02369448 type strain 35.6% 2,518,380 154 2,477 ☆☆☆☆ Scaffold 99.14% 2.1%
GCA_000583655.1 Lactobacillus farraginis JCM 14108 Lactobacillus farraginis DSM 18382 = JCM 14108 PRJDB599 SAMD00008613 type strain 42.1% 2,844,682 129 3,125 ☆☆☆☆ Contig 97.95% 0.94%
GCA_000970735.1 Lactobacillus apis Hma11 Lactobacillus apis PRJNA257137 SAMN03275733 36.6% 1,717,379 7 1,564 ☆☆☆☆ Scaffold 97.74% 0.34%
GCA_001311465.1 Lactobacillus floricola JCM 16512 Lactobacillus floricola DSM 23037 = JCM 16512 PRJDB778 SAMD00000454 type strain 34.4% 1,363,353 27 2,156 ☆☆☆ Contig 84.14% 1.54%
GCA_000410315.1 Lactobacillus paracasei subsp. paracasei Lpp14 Lactobacillus paracasei subsp. paracasei Lpp14 PRJNA178431 SAMN02469711 46.3% 2,883,118 436 2,863 ☆☆☆☆ Contig 96.83% 2.01%
GCA_000179455.1 Lactobacillus reuteri lpuph Lactobacillus reuteri lpuph PRJNA50437 SAMN02471904 38.4% 2,114,327 109 2,007 ☆☆☆☆ Contig 99.35% 0.46%
GCA_000283115.1 Lactobacillus coryniformis subsp. coryniformis CECT 5711 Lactobacillus coryniformis subsp. coryniformis CECT 5711 PRJNA163365 SAMN02471360 42.8% 2,842,941 203 2,780 ☆☆☆ Contig 99.03% 5.83%
GCA_001436225.1 Lactobacillus sharpeae DSM 20505 Lactobacillus sharpeae JCM 1186 = DSM 20505 PRJNA222257 SAMN02369377 type strain 53.4% 2,444,304 57 2,350 ☆☆☆☆ Scaffold 97.53% 1.53%
GCA_001311395.1 Lactobacillus otakiensis JCM 15040 Lactobacillus otakiensis DSM 19908 = JCM 15040 PRJDB775 SAMD00000446 type strain 42.3% 2,342,138 20 3,025 ☆☆☆☆ Contig 96.18% 0.81%
GCA_000159415.1 Lactobacillus ultunensis DSM 16047 Lactobacillus ultunensis DSM 16047 PRJNA31505 SAMN00001484 type strain 36.0% 2,248,406 48 2,117 ☆☆☆☆ Scaffold 98.28% 0.81%
GCA_000149085.2 Lactobacillus iners LactinV 09V1-c Lactobacillus iners LactinV 09V1-c PRJNA52037 SAMN00115038 32.7% 1,312,334 35 1,357 ☆☆☆☆ Contig 98.36% 0.16%
GCA_001434065.1 Lactobacillus sakei subsp. sakei DSM 20017 Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 PRJNA222257 SAMN02369509 type strain 41.1% 1,910,253 42 1,891 ☆☆☆☆ Contig 98.71% 0.16%
GCA_000469325.1 Lactobacillus shenzhenensis LY-73 Lactobacillus shenzhenensis LY-73 PRJNA200754 SAMN02469385 type strain 56.4% 3,271,684 62 2,975 ☆☆☆☆ Scaffold 98.71% 2.39%
GCA_000014505.1 Pediococcus pentosaceus ATCC 25745 Pediococcus pentosaceus ATCC 25745 PRJNA398 SAMN02598525 37.4% 1,832,387 1 1,751 ☆☆☆☆☆ Complete Genome 99.69% 0.41%
GCA_001076595.1 Lactobacillus paracasei 275_LPAR Lactobacillus paracasei PRJNA267549 SAMN03197468 46.2% 3,160,593 146 2,930 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000751275.1 Lactobacillus delbrueckii subsp. lactis unkown Lactobacillus delbrueckii subsp. lactis PRJEB5825 SAMEA2547924 49.5% 2,085,621 75 1,966 ☆☆☆☆ Scaffold 96.52% 0.16%
GCA_000970755.1 Lactobacillus kimbladii Hma2 Lactobacillus kimbladii PRJNA257141 SAMN03275734 type strain 35.8% 2,186,983 13 1,972 ☆☆☆☆ Scaffold 97.74% 0.78%
GCA_000814485.1 Lactobacillus rhamnosus 308 Lactobacillus rhamnosus PRJNA265920 SAMN03154069 46.6% 3,040,162 72 2,906 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001311075.1 Lactobacillus similis JCM 2765 Lactobacillus similis DSM 23365 = JCM 2765 PRJDB759 SAMD00000466 type strain 47.0% 3,453,494 176 3,870 ☆☆☆ Contig 94.06% 1.1%
GCA_000493455.1 Lactobacillus helveticus CIRM-BIA 951 Lactobacillus helveticus CIRM-BIA 951 PRJEB1541 SAMEA2272613 36.6% 1,902,395 159 2,008 ☆☆☆☆ Scaffold 98.87% 0.16%
GCA_001281165.1 Lactobacillus kunkeei Fhon2 Lactobacillus kunkeei PRJNA270967 SAMN03275711 36.2% 1,608,264 8 1,411 ☆☆☆☆ Scaffold 97.84% 0.48%
GCA_000511795.1 Lactobacillus namurensis Chizuka 01 Lactobacillus namurensis str. Chizuka 01 PRJDB914 SAMD00036670 51.9% 2,593,418 97 2,372 ☆☆☆☆ Contig 99.68% 0.16%
GCA_000248095.3 Lactobacillus mucosae LM1 Lactobacillus mucosae LM1 PRJNA80653 SAMN02470226 46.1% 2,434,610 2 2,212 ☆☆☆☆☆ Complete Genome 99.03% 0.99%
GCA_000221505.2 Lactobacillus oris F0423 Lactobacillus oris F0423 PRJNA61831 SAMN00195308 49.7% 2,174,937 20 2,051 ☆☆☆☆ Contig 98.92% 0.24%
GCA_000149145.2 Lactobacillus iners SPIN 2503V10-D Lactobacillus iners SPIN 2503V10-D PRJNA52031 SAMN00115035 32.6% 1,283,897 31 1,280 ☆☆☆☆ Contig 97.85% 0.16%
GCA_001434535.1 Lactobacillus animalis DSM 20602 Lactobacillus animalis KCTC 3501 = DSM 20602 PRJNA222257 SAMN02369389 type strain 41.1% 1,880,186 58 1,812 ☆☆☆☆ Scaffold 99.09% 0.16%
GCA_000019245.3 Lactobacillus paracasei Zhang Lactobacillus casei str. Zhang PRJNA28537 SAMN02603933 46.4% 2,898,456 2 2,694 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000225845.2 Lactobacillus ruminis ATCC 25644 Lactobacillus ruminis ATCC 25644 PRJNA71361 SAMN02471467 43.7% 2,069,085 100 1,927 ☆☆☆☆ Contig 98.95% 0.81%
GCA_001308215.1 Lactobacillus kunkeei LAnu Lactobacillus kunkeei PRJNA270970 SAMN03277034 37.4% 1,576,859 16 1,406 ☆☆☆☆ Contig 97.9% 0.81%
GCA_000297025.1 Lactobacillus pasteurii CRBIP 24.76 Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 PRJEB103 SAMEA2272206 type strain 38.6% 1,905,398 30 1,807 ☆☆☆☆ Contig 98.23% 0.16%
GCA_000309745.1 Lactobacillus paracasei UW4 Lactobacillus casei UW4 PRJNA68477 SAMN02472004 46.4% 2,758,298 122 2,759 ☆☆☆☆ Contig 99.25% 0.48% The organism name was amended based on the ANI result.
GCA_000409995.1 Lactobacillus paracasei subsp. paracasei Lpp228 Lactobacillus paracasei subsp. paracasei Lpp228 PRJNA178432 SAMN02469720 46.2% 2,936,043 188 2,878 ☆☆☆☆ Contig 98.62% 0.48%
GCA_001435875.1 Lactobacillus farraginis DSM 18382 Lactobacillus farraginis DSM 18382 = JCM 14108 PRJNA222257 SAMN02369501 type strain 42.0% 2,859,511 157 2,749 ☆☆☆☆ Scaffold 99.03% 1.1%
GCA_000260395.1 Lactobacillus suebicus KCTC 3549 Lactobacillus suebicus DSM 5007 = KCTC 3549 PRJDA68083 39.0% 2,654,956 128 2,498 ☆☆☆☆ Contig 98.71% 0.48%
GCA_001067625.1 Lactobacillus rhamnosus 893_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198100 46.6% 2,960,633 191 2,741 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000614735.1 Lactobacillus gallinarum JCM 2011 Lactobacillus gallinarum DSM 10532 = JCM 2011 PRJDB621 SAMD00003603 type strain 36.5% 1,918,774 74 2,075 ☆☆☆☆ Contig 98.32% 0.16%
GCA_000466845.1 Lactobacillus plantarum 2165 Lactobacillus plantarum 2165 PRJNA213979 SAMN02298725 44.5% 3,179,972 192 3,252 ☆☆☆☆ Contig 95.99% 3.6%
GCA_000469705.1 Lactobacillus acidophilus CIP 76.13 Lactobacillus acidophilus CIP 76.13 PRJEB1532 SAMEA2272342 type strain 34.6% 1,951,821 34 1,859 ☆☆☆☆ Scaffold 98.39% 0.22%
GCA_001331925.1 Lactobacillus plantarum WLPL04 Lactobacillus plantarum PRJNA295891 SAMN04092618 44.5% 3,185,263 51 2,997 ☆☆☆☆ Contig 99.03% 1.53%
GCA_001435815.1 Lactobacillus nantensis DSM 16982 Lactobacillus nantensis DSM 16982 PRJNA222257 SAMN02369491 type strain 36.2% 2,914,395 95 2,762 ☆☆☆☆ Contig 99.14% 2.1%
GCA_001433915.1 Lactobacillus pasteurii DSM 23907 Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 PRJNA222257 SAMN02369411 type strain 38.5% 1,868,110 44 1,785 ☆☆☆☆ Contig 98.23% 0.16%
GCA_001434855.1 Lactobacillus paralimentarius DSM 19674 Lactobacillus paralimentarius DSM 19674 PRJNA222257 SAMN02369437 35.3% 2,882,915 42 2,798 ☆☆☆☆ Scaffold 98.82% 2.77%
GCA_001436325.1 Lactobacillus harbinensis DSM 16991 Lactobacillus harbinensis DSM 16991 PRJNA222257 SAMN02369451 type strain 53.1% 3,136,715 164 3,049 ☆☆☆☆ Scaffold 98.39% 2.39%
GCA_001435575.1 Lactobacillus sunkii DSM 19904 Lactobacillus sunkii DSM 19904 PRJNA222257 SAMN02369477 type strain 42.1% 2,693,129 79 2,548 ☆☆☆☆ Contig 99.03% 0.81%
GCA_000410475.1 Lactobacillus paracasei subsp. paracasei Lpp125 Lactobacillus paracasei subsp. paracasei Lpp125 PRJNA178444 SAMN02641495 46.1% 3,013,500 192 2,955 ☆☆☆☆ Contig 98.94% 1.13%
GCA_000784405.1 Lactobacillus rhamnosus L31 Lactobacillus rhamnosus L31 PRJNA217079 SAMN02324553 46.7% 2,826,754 67 2,654 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000191685.2 Lactobacillus iners UPII 143-D Lactobacillus iners UPII 143-D PRJNA60373 SAMN00138211 32.6% 1,257,583 21 1,193 ☆☆☆☆ Contig 98.94% 0.16%
GCA_001433995.1 Lactobacillus kimchicus JCM 15530 Lactobacillus kimchicus JCM 15530 PRJNA222257 SAMN02369456 type strain 46.6% 2,593,269 45 2,522 ☆☆☆☆ Contig 99.03% 0.56%
GCA_001008745.1 Lactobacillus ruminis S23 Lactobacillus ruminis S23 PRJNA219503 SAMN02358826 43.7% 1,907,078 422 1,758 ☆☆☆☆ Contig 98.17% 2.74%
GCA_000474675.1 Lactobacillus brevis EW Lactobacillus brevis EW PRJNA209593 SAMN02470900 45.3% 2,885,101 38 2,883 ☆☆☆☆ Contig 99.03% 0.38%
GCA_001278015.1 Lactobacillus plantarum 5-2 Lactobacillus plantarum PRJNA257680 SAMN02953961 44.7% 3,237,652 1 3,029 ☆☆☆☆☆ Complete Genome 99.03% 2.26%
GCA_000762955.1 Lactobacillus plantarum CMPG5300 Lactobacillus plantarum CMPG5300 PRJNA193572 SAMN03083641 44.2% 3,507,828 7 3,294 ☆☆☆☆☆ Chromosome 99.03% 1.53%
GCA_000194785.1 Lactobacillus paracasei LC2W Lactobacillus casei LC2W PRJNA64433 SAMN02603877 46.3% 3,077,434 2 2,986 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000615805.1 Lactobacillus fuchuensis JCM 11249 Lactobacillus fuchuensis DSM 14340 = JCM 11249 PRJDB648 SAMD00010816 type strain 41.8% 2,107,444 71 2,205 ☆☆☆☆ Contig 97.94% 2.1%
GCA_001435555.1 Lactobacillus nodensis DSM 19682 Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 PRJNA222257 SAMN02369463 type strain 37.6% 2,683,197 22 2,654 ☆☆☆☆ Scaffold 99.14% 0.16%
GCA_000227195.1 Lactobacillus iners 7_1_47FAA Lactobacillus sp. 7_1_47FAA PRJNA40031 SAMN02463801 32.7% 1,274,722 12 1,173 ☆☆☆☆ Scaffold 99.03% 0.16% The organism name was inferred from ANI result. (98.7% against L. iners)
GCA_000932035.1 Lactobacillus rhamnosus CLS17 Lactobacillus rhamnosus PRJNA264249 SAMN03120606 46.8% 2,889,314 71 2,702 ☆☆☆☆ Contig 99.19% 0.23%
GCA_000409675.1 Lactobacillus delbrueckii subsp. lactis CRL581 Lactobacillus delbrueckii subsp. lactis CRL581 PRJNA183842 SAMN02469459 49.7% 2,136,818 16 1,923 ☆☆☆ Scaffold 93.61% 0.16%
GCA_000177755.1 Lactobacillus iners AB-1 Lactobacillus iners AB-1 PRJNA43549 SAMN02470230 32.7% 1,287,456 7 1,196 ☆☆☆☆ Contig 99.03% 0.0%
GCA_001068215.1 Lactobacillus rhamnosus 944_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198164 46.8% 2,822,292 145 2,598 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001311685.1 Lactobacillus crispatus JCM 1185 Lactobacillus crispatus DSM 20584 = JCM 1185 PRJDB800 SAMD00000420 type strain 36.6% 2,033,995 151 3,300 ☆☆☆ Contig 90.72% 0.75%
GCA_001012665.1 Lactobacillus jensenii IM18-1 Lactobacillus jensenii IM18-1 PRJNA231005 SAMN02438379 34.4% 1,705,628 107 1,702 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_000166795.1 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 PRJNA59837 SAMN02470193 type strain 42.8% 2,964,752 55 2,698 ☆☆☆☆ Scaffold 98.76% 4.34%
GCA_000410215.1 Lactobacillus paracasei subsp. paracasei Lpp229 Lactobacillus paracasei subsp. paracasei Lpp229 PRJNA178424 SAMN02469727 46.3% 2,954,364 317 2,946 ☆☆☆☆ Contig 97.77% 1.56%
GCA_000010005.1 Lactobacillus reuteri JCM 1112 Lactobacillus reuteri JCM 1112 PRJDA19011 type strain 38.9% 2,039,414 1 2,020 ☆☆☆☆☆ Complete Genome 98.55% 0.81%
GCA_000242275.1 Lactobacillus kisonensis F0435 Lactobacillus kisonensis F0435 PRJNA49693 SAMN02299436 41.7% 2,987,059 86 2,977 ☆☆☆☆ Scaffold 99.16% 0.22%
GCA_000311945.1 Lactobacillus rhamnosus LRHMDP2 Lactobacillus rhamnosus LRHMDP2 PRJNA169251 SAMN01737618 46.6% 2,911,110 50 2,742 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000418495.1 Lactobacillus rhamnosus LOCK908 Lactobacillus rhamnosus LOCK908 PRJNA196823 SAMN02603329 46.8% 2,990,900 1 2,757 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000466905.2 Lactobacillus plantarum 2025 Lactobacillus plantarum 2025 PRJNA215163 SAMN02298727 44.4% 3,334,257 164 3,293 ☆☆☆☆ Contig 98.43% 3.15%
GCA_000406345.2 Lactobacillus gasseri K7 Lactobacillus gasseri K7 PRJNA203137 SAMN02178496 34.8% 1,994,163 8 1,955 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001297025.1 Lactobacillus fermentum HFB3 Lactobacillus fermentum PRJNA294944 SAMN04038470 51.8% 2,043,356 7 2,430 ☆☆☆☆ Contig 97.65% 0.75%
GCA_000829395.1 Lactobacillus hokkaidonensis LOOC260 Lactobacillus hokkaidonensis PRJDB1726 SAMD00000344 type strain 38.2% 2,400,586 3 2,328 ☆☆☆☆☆ Complete Genome 99.3% 2.5%
GCA_001434395.1 Lactobacillus hammesii DSM 16381 Lactobacillus hammesii DSM 16381 PRJNA222257 SAMN02369488 type strain 49.4% 2,815,465 66 2,587 ☆☆☆☆ Scaffold 99.03% 0.27%
GCA_001435755.1 Lactobacillus acidipiscis DSM 15836 Lactobacillus acidipiscis DSM 15836 PRJNA222257 SAMN02369424 type strain 39.1% 2,326,083 457 2,230 ☆☆☆☆ Scaffold 99.03% 1.09%
GCA_000309685.1 Lactobacillus paracasei T71499 Lactobacillus casei T71499 PRJNA68471 SAMN02472001 46.2% 3,000,054 55 2,883 ☆☆☆☆ Contig 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_000159435.1 Lactobacillus vaginalis ATCC 49540 Lactobacillus vaginalis DSM 5837 = ATCC 49540 PRJNA31507 SAMN00001485 type strain 40.6% 1,877,332 112 1,728 ☆☆☆☆ Scaffold 98.9% 2.01%
GCA_000219475.2 Lactobacillus johnsonii pf01 Lactobacillus johnsonii pf01 PRJNA67469 SAMN02469597 34.6% 1,882,804 5 1,823 ☆☆☆☆ Contig 96.77% 0.16%
GCA_000525715.1 Lactobacillus helveticus H9 Lactobacillus helveticus H9 PRJNA49151 SAMN02641509 37.0% 1,871,119 1 2,015 ☆☆☆☆☆ Complete Genome 98.87% 0.81%
GCA_001436215.1 Lactobacillus agilis DSM 20509 Lactobacillus agilis DSM 20509 PRJNA222257 SAMN02369373 type strain 41.7% 2,058,058 72 2,025 ☆☆☆☆ Scaffold 98.23% 1.13%
GCA_000615325.1 Lactobacillus plantarum subsp. plantarum JCM 1149 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJDB641 SAMD00012694 type strain 44.5% 3,209,456 39 3,326 ☆☆☆☆ Contig 95.97% 1.53%
GCA_001436795.1 Pediococcus acidilactici AS1.2696 Pediococcus acidilactici PRJNA222257 SAMN02797809 42.1% 1,928,516 18 1,815 ☆☆☆☆ Contig 99.76% 0.93%
GCA_001436855.1 Lactobacillus plantarum DSM 13273 Lactobacillus plantarum PRJNA222257 SAMN02797770 44.2% 3,439,800 90 3,257 ☆☆☆☆ Scaffold 99.03% 1.53%
GCA_001437075.1 Pediococcus stilesii DSM 18001 Pediococcus stilesii PRJNA222257 SAMN02797812 type strain 38.1% 1,837,953 47 1,823 ☆☆☆☆ Contig 97.42% 4.82%
GCA_001437255.1 Pediococcus damnosus DSM 20331 Pediococcus damnosus PRJNA222257 SAMN02797815 type strain 38.2% 2,191,735 201 2,078 ☆☆☆ Contig 91.69% 7.32%
GCA_001437405.1 Pediococcus ethanolidurans DSM 22301 Pediococcus ethanolidurans PRJNA222257 SAMN02797818 type strain 37.2% 2,260,906 66 2,150 ☆☆☆ Contig 91.8% 8.66%
GCA_001437435.1 Lactobacillus siliginis DSM 22696 Lactobacillus siliginis PRJNA222257 SAMN02797786 type strain 44.1% 2,070,447 52 1,986 ☆☆☆☆ Scaffold 99.35% 0.89%
GCA_001438655.1 Pediococcus cellicola DSM 17757 Pediococcus cellicola PRJNA222257 SAMN02797811 type strain 39.0% 2,038,400 22 1,955 ☆☆☆ Contig 87.27% 7.82%
GCA_001438725.1 Pediococcus inopinatus DSM 20285 Pediococcus inopinatus PRJNA222257 SAMN02797814 type strain 38.6% 2,114,096 157 2,037 ☆☆☆ Contig 91.54% 8.13%
GCA_001434175.1 Lactobacillus plantarum subsp. plantarum CGMCC 1.2437 Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 PRJNA222257 SAMN02369435 type strain 44.5% 3,208,905 48 3,006 ☆☆☆☆ Scaffold 99.03% 1.53%
GCA_000204985.1 Lactobacillus johnsonii DPC 6026 Lactobacillus johnsonii DPC 6026 PRJNA56053 SAMN02603892 34.8% 1,966,342 1 1,865 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000008925.1 Lactobacillus salivarius UCC118 Lactobacillus salivarius UCC118 PRJNA13280 SAMN02604111 33.0% 2,133,977 4 2,101 ☆☆☆☆☆ Complete Genome 99.03% 0.48%
GCA_001302645.1 Lactobacillus plantarum HFC8 Lactobacillus plantarum PRJNA295007 SAMN04038608 44.3% 3,405,709 11 3,364 ☆☆☆☆☆ Complete Genome 99.35% 2.02%
GCA_000504525.1 Lactobacillus equi DPC 6820 Lactobacillus equi DPC 6820 PRJNA216979 SAMN02404457 39.2% 2,175,589 203 2,077 ☆☆☆☆ Contig 99.03% 2.28%
GCA_001433815.1 Lactobacillus pobuzihii KCTC 13174 Lactobacillus pobuzihii E100301 = KCTC 13174 PRJNA222257 SAMN02369471 type strain 37.7% 2,323,622 91 2,106 ☆☆☆☆ Contig 98.39% 1.02%
GCA_001005695.1 Lactobacillus plantarum TIFN101 Lactobacillus plantarum PRJNA263713 SAMN03160585 44.5% 3,079,349 174 2,937 ☆☆☆☆ Contig 99.35% 2.18%
GCA_000026485.1 Lactobacillus paracasei BL23 Lactobacillus casei BL23 PRJEA30359 SAMEA2272724 46.3% 3,079,196 1 2,996 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_001010175.1 Lactobacillus plantarum 8 RA-3 Lactobacillus plantarum PRJNA279953 SAMN03452286 44.4% 3,330,093 18 3,114 ☆☆☆☆ Contig 99.03% 1.85%
GCA_000410115.1 Lactobacillus paracasei subsp. paracasei Lpp48 Lactobacillus paracasei subsp. paracasei Lpp48 PRJNA178445 SAMN02641496 46.1% 2,812,104 998 2,847 ☆☆☆ Contig 91.58% 3.71%
GCA_001434735.1 Lactobacillus buchneri DSM 20057 Lactobacillus buchneri DSM 20057 PRJNA222257 SAMN02369438 type strain 44.4% 2,446,657 90 2,345 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000380265.1 Pediococcus acidilactici D3 Pediococcus acidilactici D3 PRJNA193440 SAMN01991044 42.1% 1,962,826 11 1,965 ☆☆☆ Scaffold 91.58% 5.08%
GCA_001189855.1 Lactobacillus delbrueckii subsp. indicus JCM 15610 Lactobacillus delbrueckii subsp. indicus PRJNA289289 SAMN03852101 type strain 49.5% 1,877,412 85 1,832 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001435795.1 Lactobacillus delbrueckii subsp. indicus DSM 15996 Lactobacillus delbrueckii subsp. indicus DSM 15996 PRJNA222257 SAMN02369368 type strain 49.6% 1,863,572 139 1,807 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000967245.1 Lactobacillus mellis Hon2 Lactobacillus mellis PRJNA257182 SAMN03271966 type strain 36.2% 1,810,599 7 1,650 ☆☆☆☆ Scaffold 98.18% 0.48%
GCA_001311375.1 Lactobacillus equigenerosi JCM 14505 Lactobacillus equigenerosi DSM 18793 = JCM 14505 PRJDB774 SAMD00000442 type strain 42.6% 1,593,179 38 2,100 ☆☆☆ Contig 91.52% 0.08%
GCA_001434665.1 Lactobacillus tucceti DSM 20183 Lactobacillus tucceti DSM 20183 PRJNA222257 SAMN02369431 type strain 34.1% 2,173,857 51 2,103 ☆☆☆☆ Scaffold 99.14% 1.38%
GCA_000296835.1 Lactobacillus hominis CRBIP 24.179 Lactobacillus hominis DSM 23910 = CRBIP 24.179 PRJEB105 SAMEA2272002 type strain 35.1% 1,928,135 36 1,877 ☆☆☆☆ Contig 96.65% 0.16%
GCA_000260335.1 Lactobacillus salivarius SMXD51 Lactobacillus salivarius SMXD51 PRJNA75261 SAMN02470767 32.9% 1,967,690 10 1,856 ☆☆☆☆ Scaffold 98.17% 0.38%
GCA_000162435.1 Lactobacillus jensenii 115-3-CHN Lactobacillus jensenii 115-3-CHN PRJNA38645 SAMN02463747 34.1% 1,648,660 18 1,499 ☆☆☆☆ Scaffold 97.85% 0.16%
GCA_001312865.1 Lactobacillus thailandensis JCM 13996 Lactobacillus thailandensis DSM 22698 = JCM 13996 PRJDB898 SAMD00016810 type strain 53.4% 2,062,475 21 2,528 ☆☆☆☆ Contig 95.27% 1.61%
GCA_001434475.1 Lactobacillus suebicus DSM 5007 Lactobacillus suebicus DSM 5007 = KCTC 3549 PRJNA222257 SAMN02369476 type strain 39.0% 2,651,315 81 2,495 ☆☆☆☆ Contig 98.71% 0.48%
GCA_000712505.1 Lactobacillus rhamnosus PEL5 Lactobacillus rhamnosus PEL5 PRJNA237053 SAMN02602920 46.7% 2,897,032 71 2,735 ☆☆☆☆ Contig 99.35% 0.16%
GCA_001190005.1 Lactobacillus delbrueckii subsp. sunkii JCM 17838 Lactobacillus delbrueckii subsp. sunkii PRJNA289290 SAMN03852102 type strain 50.1% 1,945,263 32 1,823 ☆☆☆☆ Contig 99.03% 0.16%
GCA_001435475.1 Lactobacillus antri DSM 16041 Lactobacillus antri DSM 16041 PRJNA222257 SAMN02369390 type strain 51.1% 2,241,837 92 2,103 ☆☆☆☆ Contig 99.26% 0.24%
GCA_001436535.1 Lactobacillus mali DSM 20444 Lactobacillus mali KCTC 3596 = DSM 20444 PRJNA222257 SAMN02369460 type strain 36.1% 2,593,412 209 2,516 ☆☆☆☆ Scaffold 98.39% 1.42%
GCA_000615245.1 Lactobacillus rhamnosus JCM 1136 Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 PRJDB639 SAMD00000741 type strain 46.7% 2,934,843 63 2,988 ☆☆☆☆ Contig 98.81% 0.16%
GCA_000179475.1 Lactobacillus salivarius ACS-116-V-Col5a Lactobacillus salivarius ACS-116-V-Col5a PRJNA49443 SAMN00017035 32.7% 2,044,602 154 2,061 ☆☆☆☆ Contig 98.86% 0.81%
GCA_000160855.1 Lactobacillus helveticus DSM 20075 Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 PRJNA34619 SAMN00139430 type strain 36.8% 2,020,582 49 1,944 ☆☆☆☆ Scaffold 98.01% 0.16%
GCA_001435665.1 Lactobacillus amylolyticus DSM 11664 Lactobacillus amylolyticus DSM 11664 PRJNA222257 SAMN02369499 type strain 38.2% 1,537,388 98 1,566 ☆☆☆☆ Contig 99.03% 0.81%
GCA_000442865.1 Lactobacillus acidophilus CIRM-BIA 442 Lactobacillus acidophilus CIRM-BIA 442 PRJEB1530 SAMEA2272381 34.7% 1,986,992 19 1,851 ☆☆☆☆ Contig 99.03% 0.16%
GCA_000615765.1 Lactobacillus equi JCM 10991 Lactobacillus equi DSM 15833 = JCM 10991 PRJDB647 SAMD00013881 type strain 39.0% 2,242,681 158 2,425 ☆☆☆☆ Contig 97.64% 2.28%
GCA_001435325.1 Lactobacillus intestinalis DSM 6629 Lactobacillus intestinalis DSM 6629 PRJNA222257 SAMN02369403 type strain 35.4% 2,009,795 55 1,841 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000410275.1 Lactobacillus paracasei subsp. paracasei CNCM I-4270 Lactobacillus paracasei subsp. paracasei CNCM I-4270 PRJNA178429 SAMN02469729 46.2% 2,987,352 461 2,912 ☆☆☆☆ Contig 98.08% 1.08%
GCA_000827145.1 Lactobacillus paracasei KL1-Liu Lactobacillus casei PRJNA263696 SAMN03105784 46.5% 2,848,777 89 2,748 ☆☆☆☆ Scaffold 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_001312045.1 Lactobacillus satsumensis JCM 12392 Lactobacillus satsumensis DSM 16230 = JCM 12392 PRJDB826 SAMD00000518 type strain 40.1% 2,635,695 122 3,411 ☆☆☆ Contig 94.59% 1.02%
GCA_000833405.1 Lactobacillus brevis TMW 1.313 Lactobacillus brevis PRJNA264952 SAMN03144671 45.5% 2,735,295 11 2,941 ☆☆☆ Scaffold 85.45% 0.48%
GCA_001044015.1 Lactobacillus rhamnosus Lr071 Lactobacillus rhamnosus PRJNA253894 SAMN03196657 46.6% 2,827,712 630 2,702 ☆☆☆ Contig 93.2% 3.03%
GCA_001281265.1 Lactobacillus kunkeei YH-15 Lactobacillus kunkeei DSM 12361 = ATCC 700308 PRJNA270974 SAMN03275719 type strain 36.4% 1,515,712 16 1,353 ☆☆☆☆ Contig 97.9% 0.81%
GCA_000410155.1 Lactobacillus paracasei subsp. paracasei Lpp22 Lactobacillus paracasei subsp. paracasei Lpp22 PRJNA178450 SAMN02469708 46.3% 2,749,106 270 2,669 ☆☆☆☆ Contig 99.35% 0.7%
GCA_000410255.1 Lactobacillus paracasei subsp. paracasei Lpp7 Lactobacillus paracasei subsp. paracasei Lpp7 PRJNA178427 SAMN02469713 46.3% 2,842,940 611 2,756 ☆☆☆☆ Contig 97.58% 0.16%
GCA_001281205.1 Lactobacillus kunkeei LAko Lactobacillus kunkeei PRJNA270965 SAMN03275716 37.7% 1,552,941 7 1,383 ☆☆☆☆ Contig 97.9% 0.81%
GCA_000165885.1 Lactobacillus crispatus CTV-05 Lactobacillus crispatus CTV-05 PRJNA36325 SAMN02463723 37.1% 2,364,583 25 2,393 ☆☆☆ Scaffold 86.47% 0.16%
GCA_000409955.1 Lactobacillus paracasei subsp. paracasei Lpp223 Lactobacillus paracasei subsp. paracasei Lpp223 PRJNA178453 SAMN02469706 46.2% 3,051,929 167 2,988 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000758185.1 Lactobacillus reuteri LTH5448 Lactobacillus reuteri PRJNA248653 SAMN02869572 38.4% 1,980,298 36 1,898 ☆☆☆☆ Contig 97.31% 0.81%
GCA_000271445.1 Lactobacillus pentosus KCA1 Lactobacillus pentosus KCA1 PRJNA81575 SAMN02469614 46.4% 3,426,323 1 3,039 ☆☆☆☆☆ Chromosome 99.03% 2.0%
GCA_000712495.1 Lactobacillus rhamnosus E800 Lactobacillus rhamnosus E800 PRJNA236793 SAMN02602919 46.6% 3,031,620 83 2,859 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000217735.2 Lactobacillus salivarius GJ-24 Lactobacillus salivarius GJ-24 PRJNA67679 SAMN02470918 33.0% 1,995,968 11 1,895 ☆☆☆☆ Contig 99.03% 0.38%
GCA_000347515.1 Lactobacillus plantarum UCMA 3037 Lactobacillus plantarum UCMA 3037 PRJNA186734 SAMN02471400 44.5% 3,108,278 68 2,910 ☆☆☆☆ Scaffold 99.35% 1.53%
GCA_000011045.1 Lactobacillus rhamnosus ATCC 53103 Lactobacillus rhamnosus GG PRJDA40637 46.7% 3,005,051 1 2,811 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_000410435.1 Lactobacillus paracasei subsp. paracasei CNCM I-4649 Lactobacillus paracasei subsp. paracasei CNCM I-4649 PRJNA178439 SAMN02469704 46.2% 2,981,014 665 2,891 ☆☆☆ Contig 94.83% 1.69%
GCA_000966475.1 Lactobacillus plantarum NL42 Lactobacillus plantarum PRJNA277393 SAMN03390058 44.4% 3,353,072 52 3,224 ☆☆☆☆ Scaffold 99.35% 2.5%
GCA_000931425.1 Lactobacillus plantarum B21 Lactobacillus plantarum PRJNA271910 SAMN03278695 44.5% 3,284,260 1 3,057 ☆☆☆☆☆ Complete Genome 99.03% 1.96%
GCA_001297905.1 Lactobacillus fermentum UCO-979C Lactobacillus fermentum PRJNA296497 SAMN04100088 51.9% 2,011,828 108 2,227 ☆☆☆ Contig 93.98% 3.26%
GCA_000162395.1 Lactobacillus fermentum 28-3-CHN Lactobacillus fermentum 28-3-CHN PRJNA38517 SAMN02463745 52.2% 2,026,518 42 1,929 ☆☆☆☆ Scaffold 98.63% 0.24%
GCA_001012685.1 Lactobacillus jensenii IM18-3 Lactobacillus jensenii IM18-3 PRJNA231005 SAMN02438380 34.4% 1,687,818 103 1,691 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_000466865.2 Lactobacillus rhamnosus 2166 Lactobacillus rhamnosus 2166 PRJNA213993 SAMN02298796 46.6% 3,016,360 84 3,380 ☆☆☆☆ Contig 96.46% 0.94%
GCA_000312645.1 Lactobacillus equicursoris CIP 110162 Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 PRJEB174 SAMEA2272084 type strain 47.8% 2,154,590 231 1,996 ☆☆☆☆ Contig 98.92% 3.0%
GCA_000949485.1 Lactobacillus paracasei DSM 20207 Lactobacillus paracasei PRJNA274162 SAMN03323315 46.2% 3,023,416 92 2,945 ☆☆☆☆ Contig 99.35% 0.48%
GCA_000160715.1 Lactobacillus reuteri MM2-3 Lactobacillus reuteri MM2-3 PRJNA34627 SAMN00002242 38.7% 2,015,721 95 1,916 ☆☆☆☆ Scaffold 98.26% 0.81%
GCA_001008765.1 Lactobacillus ruminis DPC 6830 Lactobacillus ruminis PRJNA239217 SAMN02650408 43.3% 2,042,717 80 1,918 ☆☆☆☆ Contig 98.39% 1.02%
GCA_000615365.1 Lactobacillus sakei subsp. sakei JCM 1157 Lactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 PRJDB642 SAMD00011898 type strain 41.1% 1,908,197 37 2,044 ☆☆☆☆ Contig 98.17% 0.22%
GCA_001012745.1 Lactobacillus jensenii IM3 Lactobacillus jensenii IM3 PRJNA231005 SAMN02438383 34.0% 1,624,754 74 1,531 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_000497065.1 Lactobacillus crispatus EM-LC1 Lactobacillus crispatus EM-LC1 PRJNA200566 SAMN02471465 37.0% 1,829,425 63 1,797 ☆☆☆ Contig 89.38% 0.0%
GCA_001436705.1 Lactobacillus sucicola DSM 21376 Lactobacillus sucicola DSM 21376 = JCM 15457 PRJNA222257 SAMN02369475 type strain 38.5% 2,459,509 18 2,262 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000309725.1 Lactobacillus paracasei UW1 Lactobacillus casei UW1 PRJNA68475 SAMN02472003 46.4% 2,865,538 143 2,892 ☆☆☆☆ Contig 99.16% 0.48% The organism name was amended based on the ANI result.
GCA_001436035.1 Lactobacillus sanfranciscensis DSM 20451 Lactobacillus sanfranciscensis DSM 20451 PRJNA222257 SAMN02369496 type strain 34.7% 1,231,754 68 1,253 ☆☆☆☆ Scaffold 99.17% 0.65%
GCA_001434335.1 Lactobacillus kalixensis DSM 16043 Lactobacillus kalixensis DSM 16043 PRJNA222257 SAMN02369405 type strain 36.1% 2,078,190 108 1,938 ☆☆☆☆ Scaffold 99.03% 0.81%
GCA_001044095.1 Lactobacillus rhamnosus Lr032 Lactobacillus rhamnosus PRJNA253894 SAMN03196659 46.6% 2,687,953 973 2,544 ☆☆☆ Contig 88.98% 2.4%
GCA_001436135.1 Lactobacillus thailandensis DSM 22698 Lactobacillus thailandensis DSM 22698 = JCM 13996 PRJNA222257 SAMN02369479 type strain 53.5% 2,060,676 23 1,893 ☆☆☆☆ Scaffold 98.06% 1.77%
GCA_000409835.1 Lactobacillus paracasei subsp. tolerans Lpl7 Lactobacillus paracasei subsp. tolerans Lpl7 PRJNA178446 SAMN02469714 46.2% 3,089,104 91 2,958 ☆☆☆☆ Contig 99.35% 0.48% Shows higher ANI value against L. paracasei subsp. paracasei (98.5%) than subsp. torlerans.
GCA_000185405.1 Lactobacillus iners ATCC 55195 Lactobacillus iners ATCC 55195 PRJNA53061 SAMN00216799 32.5% 1,238,993 7 1,129 ☆☆☆☆ Scaffold 99.68% 0.16%
GCA_001281285.1 Lactobacillus kunkeei LAni Lactobacillus kunkeei PRJNA270969 SAMN03275718 37.3% 1,490,020 8 1,338 ☆☆☆☆ Contig 97.58% 0.48%
GCA_000414365.1 Lactobacillus rhamnosus CRL1505 Lactobacillus rhamnosus CRL1505 PRJNA207099 SAMN02469462 46.3% 3,417,091 218 3,125 ☆☆☆☆ Contig 99.35% 5.0%
GCA_001039045.1 Lactobacillus herbarum TCF032-E4 Lactobacillus herbarum PRJNA286806 SAMN03770836 type strain 43.5% 2,899,876 55 2,805 ☆☆☆☆ Contig 99.24% 2.5%
GCA_000159455.2 Lactobacillus reuteri SD2112 Lactobacillus reuteri SD2112 PRJNA30643 SAMN00001494 39.0% 2,316,838 5 2,281 ☆☆☆☆☆ Complete Genome 99.35% 0.16%
GCA_001434295.1 Lactobacillus versmoldensis DSM 14857 Lactobacillus versmoldensis DSM 14857 = KCTC 3814 PRJNA222257 SAMN02369386 type strain 38.3% 2,373,204 62 2,330 ☆☆☆☆ Contig 99.14% 1.04%
GCA_001368755.1 Lactobacillus fermentum 222 Lactobacillus fermentum PRJEB5182 SAMEA3158475 52.1% 1,950,408 73 1,943 ☆☆☆☆ Contig 98.79% 0.16%
GCA_000410335.1 Lactobacillus paracasei subsp. tolerans Lpl14 Lactobacillus paracasei subsp. tolerans Lpl14 PRJNA178433 SAMN02469703 46.3% 3,014,095 141 2,901 ☆☆☆☆ Contig 99.35% 1.16% Shows higher ANI value against L. paracasei subsp. paracasei (98.4%) than subsp. torlerans.
GCA_001067265.1 Lactobacillus salivarius 778_LSAL Lactobacillus salivarius PRJNA267549 SAMN03197988 32.7% 1,926,186 56 1,856 ☆☆☆☆ Scaffold 98.87% 0.48%
GCA_000010145.1 Lactobacillus fermentum IFO 3956 Lactobacillus fermentum IFO 3956 PRJDA18979 51.5% 2,098,685 1 2,087 ☆☆☆☆☆ Complete Genome 98.79% 0.24%
GCA_001436755.1 Lactobacillus aquaticus DSM 21051 Lactobacillus aquaticus DSM 21051 PRJNA222257 SAMN02369378 type strain 37.4% 2,407,726 36 2,213 ☆☆☆☆ Scaffold 98.87% 0.48%
GCA_001437335.1 Lactobacillus parabuchneri DSM 15352 Lactobacillus parabuchneri PRJNA222257 SAMN02797773 43.5% 2,595,143 174 2,388 ☆☆☆☆ Scaffold 98.63% 0.38%
GCA_001437365.1 Lactobacillus amylovorus DSM 16698 Lactobacillus amylovorus DSM 16698 PRJNA222257 SAMN02797775 37.8% 2,001,630 162 1,949 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000056065.1 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 PRJNA16871 SAMEA3138258 type strain 49.7% 1,864,998 1 1,900 ☆☆☆☆☆ Complete Genome 98.39% 0.81%
GCA_000967195.1 Lactobacillus kullabergensis Biut2 Lactobacillus kullabergensis PRJNA257142 SAMN03271965 type strain 35.5% 2,118,378 7 1,943 ☆☆☆☆ Scaffold 97.1% 0.78%
GCA_001077025.1 Lactobacillus fermentum 779_LFER Lactobacillus fermentum PRJNA267549 SAMN03197989 52.1% 1,935,807 169 1,871 ☆☆☆☆ Contig 98.47% 0.55%
GCA_000743075.1 Lactobacillus rhamnosus 24 Lactobacillus rhamnosus PRJNA256139 SAMN02983263 46.7% 2,922,140 90 2,751 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000508405.1 Lactobacillus rhamnosus LR231 Lactobacillus rhamnosus LR231 PRJNA222567 SAMN02469586 47.1% 2,592,265 183 2,427 ☆☆☆☆ Contig 98.8% 0.16%
GCA_000615205.1 Lactobacillus casei JCM 1134 Lactobacillus casei DSM 20011 = JCM 1134 PRJDB638 SAMD00015724 type strain 47.7% 2,780,019 178 3,005 ☆☆☆☆ Contig 97.77% 0.27%
GCA_000284715.1 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519 Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519 PRJNA67861 SAMN02436863 49.9% 1,796,539 70 1,838 ☆☆☆☆ Contig 99.03% 0.18%
GCA_001435655.1 Lactobacillus paraplantarum DSM 10667 Lactobacillus paraplantarum DSM 10667 PRJNA222257 SAMN02369508 type strain 43.7% 3,395,753 252 3,192 ☆☆☆☆ Scaffold 99.35% 2.72%
GCA_000731855.1 Lactobacillus plantarum Lp90 Lactobacillus plantarum PRJNA241429 SAMN02689810 44.3% 3,324,076 33 3,140 ☆☆☆☆ Contig 99.35% 1.53%
GCA_001437155.1 Lactobacillus mali ATCC 27304 Lactobacillus mali PRJNA222257 SAMN02797767 36.4% 2,437,055 78 2,320 ☆☆☆☆ Scaffold 98.58% 1.02%
GCA_000615845.1 Lactobacillus hayakitensis JCM 14209 Lactobacillus hayakitensis DSM 18933 = JCM 14209 PRJDB650 SAMD00008721 type strain 34.0% 1,667,319 82 1,665 ☆☆☆☆ Contig 95.62% 0.08%
GCA_001006025.1 Lactobacillus helveticus MB2-1 Lactobacillus helveticus PRJNA274663 SAMN03328961 36.9% 2,084,058 1 2,337 ☆☆☆☆☆ Complete Genome 98.87% 0.16%
GCA_000410375.1 Lactobacillus paracasei subsp. paracasei Lpp71 Lactobacillus paracasei subsp. paracasei Lpp71 PRJNA178435 SAMN02469712 46.5% 2,684,092 825 2,617 ☆☆☆ Contig 92.39% 1.65%
GCA_000474695.1 Lactobacillus plantarum WJL Lactobacillus plantarum WJL PRJNA209589 SAMN02470914 44.2% 3,477,495 102 3,309 ☆☆☆☆ Contig 99.35% 1.53%
GCA_001281175.1 Lactobacillus apinorum Fhon13 Lactobacillus apinorum PRJNA270968 SAMN03275710 type strain 34.6% 1,460,240 9 1,315 ☆☆☆☆ Scaffold 97.84% 0.48%
GCA_001434095.1 Lactobacillus fructivorans DSM 20203 Lactobacillus fructivorans KCTC 3543 = DSM 20203 PRJNA222257 SAMN02369432 type strain 38.9% 1,372,365 16 1,334 ☆☆☆☆ Contig 98.06% 0.43%
GCA_001046835.1 Lactobacillus reuteri IRT Lactobacillus reuteri PRJNA276785 SAMN03382532 38.9% 1,993,967 1 1,956 ☆☆☆☆☆ Complete Genome 98.71% 0.81%
GCA_001076935.1 Lactobacillus paracasei 525_LPAR Lactobacillus paracasei PRJNA267549 SAMN03197720 46.1% 3,181,805 115 2,994 ☆☆☆☆ Contig 98.71% 0.48%
GCA_000192165.1 Lactobacillus delbrueckii subsp. lactis DSM 20072 Lactobacillus delbrueckii subsp. lactis DSM 20072 PRJNA53001 SAMN00253996 type strain 49.8% 2,071,079 26 1,864 ☆☆☆☆ Scaffold 98.9% 0.0%
GCA_001065365.1 Lactobacillus rhamnosus 541_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197739 46.8% 3,016,122 77 2,780 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000185465.1 Lactobacillus fructivorans KCTC 3543 Lactobacillus fructivorans KCTC 3543 = DSM 20203 PRJNA61453 SAMN02470196 type strain 38.9% 1,373,326 5 1,349 ☆☆☆☆ Scaffold 97.98% 0.43%
GCA_001436455.1 Lactobacillus jensenii DSM 20557 Lactobacillus jensenii DSM 20557 PRJNA222257 SAMN02369404 type strain 34.3% 1,610,627 99 1,478 ☆☆☆☆ Scaffold 98.71% 0.24%
GCA_001188985.1 Lactobacillus pentosus FL0421 Lactobacillus pentosus PRJNA287739 SAMN03785590 46.2% 3,716,548 19 3,357 ☆☆☆☆ Contig 99.35% 2.0%
GCA_000217755.2 Lactobacillus ruminis SPM0211 Lactobacillus ruminis SPM0211 PRJNA67675 SAMN02470898 43.7% 2,172,227 12 2,043 ☆☆☆☆ Contig 98.39% 0.97%
GCA_000805355.1 Lactobacillus curvatus NRIC0822 Lactobacillus curvatus PRJNA265031 SAMN03145063 41.8% 1,944,912 144 1,957 ☆☆☆☆ Contig 98.49% 1.42%
GCA_000179955.1 Lactobacillus iners LEAF 2052A-d Lactobacillus iners LEAF 2052A-d PRJNA52043 SAMN00115041 32.7% 1,322,320 28 1,251 ☆☆☆☆ Contig 98.94% 0.16%
GCA_001433855.1 Lactobacillus brevis DSM 20054 Lactobacillus brevis ATCC 14869 = DSM 20054 PRJNA222257 SAMN02369420 type strain 46.0% 2,474,438 11 2,423 ☆☆☆☆ Scaffold 99.03% 0.48%
GCA_000410095.1 Lactobacillus paracasei subsp. paracasei CNCM I-2877 Lactobacillus paracasei subsp. paracasei CNCM I-2877 PRJNA178422 SAMN02641492 46.1% 2,970,568 481 2,915 ☆☆☆☆ Contig 95.85% 1.18%
GCA_001044025.1 Lactobacillus rhamnosus Lr108 Lactobacillus rhamnosus PRJNA253894 SAMN03196652 46.7% 2,846,068 148 2,715 ☆☆☆☆ Contig 99.35% 0.54%
GCA_000176975.2 Lactobacillus crispatus SJ-3C-US Lactobacillus crispatus SJ-3C-US PRJNA42533 SAMN02463837 36.7% 2,165,034 70 2,088 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000472265.1 Lactobacillus fermentum Lf1 Lactobacillus fermentum Lf1 PRJNA198062 SAMN02053534 52.6% 1,815,647 250 1,738 ☆☆☆☆ Contig 98.79% 0.16%
GCA_000958505.1 Lactobacillus paracasei NRIC1917 Lactobacillus paracasei NRIC 1917 PRJDB1560 SAMD00000557 46.3% 2,957,392 119 2,761 ☆☆☆☆ Contig 99.35% 0.81%
GCA_001433875.1 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 PRJNA222257 SAMN02369483 type strain 50.0% 1,748,504 188 1,741 ☆☆☆☆ Scaffold 98.98% 0.16%
GCA_001433985.1 Lactobacillus amylovorus DSM 20531 Lactobacillus amylovorus DSM 20531 PRJNA222257 SAMN02369422 type strain 37.8% 2,017,377 116 2,045 ☆☆☆☆ Scaffold 98.92% 0.16%
GCA_000604145.1 Lactobacillus plantarum WHE 92 Lactobacillus plantarum WHE 92 PRJNA215997 SAMN02712082 44.8% 2,928,189 186 3,492 ☆☆☆ Contig 94.96% 2.89%
GCA_000301135.1 Lactobacillus crispatus FB077-07 Lactobacillus crispatus FB077-07 PRJNA52105 SAMN02463885 36.8% 2,699,381 10 2,599 ☆☆☆☆ Scaffold 99.03% 0.56%
GCA_000091765.1 Lactobacillus crispatus ST1 Lactobacillus crispatus ST1 PRJEA46813 SAMEA2272191 36.9% 2,043,161 1 1,989 ☆☆☆☆☆ Chromosome 99.03% 0.16%
GCA_000410235.1 Lactobacillus paracasei subsp. paracasei Lpp74 Lactobacillus paracasei subsp. paracasei Lpp74 PRJNA178426 SAMN02469728 46.3% 3,032,714 190 2,878 ☆☆☆☆ Contig 97.72% 0.83%
GCA_000255495.2 Lactobacillus vini DSM 20605 Lactobacillus vini DSM 20605 PRJNA81013 SAMN02471380 type strain 37.6% 2,195,706 220 2,106 ☆☆☆☆ Contig 99.03% 0.47%
GCA_001437205.1 Lactobacillus selangorensis DSM 13344 Lactobacillus selangorensis PRJNA222257 SAMN02797771 type strain 46.4% 2,086,969 32 2,068 ☆☆☆☆ Contig 98.71% 0.98%
GCA_001434005.1 Lactobacillus crispatus DSM 20584 Lactobacillus crispatus DSM 20584 = JCM 1185 PRJNA222257 SAMN02369387 type strain 36.6% 2,057,071 150 2,017 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000785105.1 Lactobacillus curieae CCTCC M 2011381 Lactobacillus curieae PRJNA266911 SAMN03175170 type strain 39.6% 2,185,962 29 2,112 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000966835.1 Lactobacillus fermentum LfQi6 Lactobacillus fermentum PRJNA276297 SAMN03372370 51.5% 2,199,799 36 2,098 ☆☆☆☆ Scaffold 98.79% 0.16%
GCA_000615725.1 Lactobacillus paralimentarius JCM 10415 Lactobacillus paralimentarius DSM 13238 = JCM 10415 PRJDB646 SAMD00012331 type strain 35.1% 2,523,585 210 2,645 ☆☆☆☆ Contig 97.93% 2.34%
GCA_001434115.1 Lactobacillus zymae DSM 19395 Lactobacillus zymae DSM 19395 PRJNA222257 SAMN02369498 type strain 53.6% 2,704,501 59 2,456 ☆☆☆☆ Scaffold 99.16% 0.81%
GCA_001067885.1 Lactobacillus rhamnosus 906_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198113 46.6% 2,966,367 192 2,732 ☆☆☆☆ Contig 98.71% 0.54%
GCA_001435115.1 Lactobacillus paracollinoides DSM 15502 Lactobacillus paracollinoides DSM 15502 = JCM 11969 PRJNA222257 SAMN02369376 type strain 46.9% 3,476,642 202 3,198 ☆☆☆☆ Scaffold 98.95% 1.13%
GCA_000189515.1 Lactobacillus helveticus H10 Lactobacillus helveticus H10 PRJNA49153 SAMN02603939 36.8% 2,172,383 2 2,265 ☆☆☆☆☆ Complete Genome 98.87% 1.45%
GCA_000801045.1 Lactobacillus rhamnosus 116 Lactobacillus rhamnosus PRJNA265918 SAMN03154065 46.6% 2,966,235 90 2,771 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000026525.1 Lactobacillus rhamnosus Lc 705 Lactobacillus rhamnosus Lc 705 PRJEA32197 SAMEA2272728 46.7% 3,033,106 2 2,857 ☆☆☆☆☆ Complete Genome 98.71% 0.16%
GCA_000182855.2 Lactobacillus amylovorus GRL 1112 Lactobacillus amylovorus GRL 1112 PRJNA42073 SAMN02603306 38.1% 2,126,674 3 2,166 ☆☆☆☆☆ Chromosome 99.03% 0.81%
GCA_000298115.2 Lactobacillus buchneri CD034 Lactobacillus buchneri CD034 PRJNA71051 SAMN02603054 44.2% 2,563,168 4 2,424 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_001436045.1 Lactobacillus frumenti DSM 13145 Lactobacillus frumenti DSM 13145 PRJNA222257 SAMN02369487 type strain 42.6% 1,733,578 26 1,679 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001433755.1 Lactobacillus pentosus DSM 20314 Lactobacillus pentosus DSM 20314 PRJNA222257 SAMN02369484 type strain 46.3% 3,647,705 60 3,272 ☆☆☆☆ Scaffold 97.1% 2.0%
GCA_001012675.1 Lactobacillus jensenii IM59 Lactobacillus jensenii IM59 PRJNA231005 SAMN02438381 34.2% 1,667,743 65 1,588 ☆☆☆☆ Scaffold 98.71% 0.16%
GCA_001435095.1 Lactobacillus spicheri DSM 15429 Lactobacillus spicheri DSM 15429 PRJNA222257 SAMN02369497 type strain 55.9% 2,749,197 37 2,459 ☆☆☆☆ Scaffold 98.99% 0.16%
GCA_000410175.1 Lactobacillus paracasei subsp. paracasei Lpp225 Lactobacillus paracasei subsp. paracasei Lpp225 PRJNA178454 SAMN02469715 46.3% 3,086,694 74 2,979 ☆☆☆☆ Contig 99.35% 0.48%
GCA_001311425.1 Lactobacillus kisonensis JCM 15041 Lactobacillus kisonensis DSM 19906 = JCM 15041 PRJDB776 SAMD00000447 type strain 41.7% 3,009,421 108 3,922 ☆☆☆ Contig 90.26% 0.4%
GCA_000760615.1 Lactobacillus kullabergensis wkB10 Lactobacillus sp. wkB10 PRJNA260938 SAMN03067537 35.4% 2,084,639 32 1,928 ☆☆☆☆ Contig 97.74% 0.81% The organism name was inferred from ANI result. (94.1% against L. kullabergensis)
GCA_000615685.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens JCM 6985 Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 PRJDB645 SAMD00008926 type strain 37.2% 2,254,088 123 2,435 ☆☆☆☆ Contig 96.96% 0.88%
GCA_000304715.1 Lactobacillus florum 2F Lactobacillus florum 2F PRJNA172730 SAMN02471614 41.5% 1,261,842 46 1,196 ☆☆☆☆ Contig 97.77% 0.06%
GCA_000177035.2 Lactobacillus gasseri SV-16A-US Lactobacillus gasseri SV-16A-US PRJNA42543 SAMN02463842 34.8% 2,001,744 10 1,930 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001068195.1 Lactobacillus rhamnosus 943_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03198163 46.6% 3,048,598 212 2,833 ☆☆☆☆ Contig 99.35% 0.32%
GCA_000687495.1 Lactobacillus plantarum AG30 Lactobacillus plantarum PRJNA239498 SAMN02743874 44.3% 3,442,875 48 3,256 ☆☆☆☆ Contig 99.35% 3.15%
GCA_001005625.1 Lactobacillus rhamnosus CNCM-I-3698 Lactobacillus rhamnosus PRJNA280583 SAMN03465328 46.7% 2,966,480 71 2,770 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000418515.1 Lactobacillus paracasei LOCK919 Lactobacillus casei LOCK919 PRJNA196824 SAMN02603330 46.2% 3,143,369 2 3,007 ☆☆☆☆☆ Complete Genome 99.35% 0.81% The organism name was amended based on the ANI result.
GCA_001067335.1 Lactobacillus rhamnosus 784_LRHA Lactobacillus rhamnosus PRJNA267549 SAMN03197995 46.6% 2,978,131 143 2,775 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_000176995.2 Lactobacillus gasseri SJ-9E-US Lactobacillus gasseri SJ-9E-US PRJNA42535 SAMN02463838 34.9% 1,784,458 8 1,688 ☆☆☆☆ Scaffold 99.35% 0.16%
GCA_001421135.1 Lactobacillus kunkeei LAfl Lactobacillus kunkeei PRJNA270964 SAMN03275715 37.0% 1,567,135 14 1,438 ☆☆☆☆ Scaffold 97.58% 1.13%
GCA_000179435.1 Lactobacillus reuteri mlc3 Lactobacillus reuteri mlc3 PRJNA50435 SAMN02471903 38.5% 2,014,837 100 1,934 ☆☆☆☆ Contig 99.35% 0.16%
GCA_000497795.1 Lactobacillus acidophilus CFH Lactobacillus acidophilus CFH PRJNA227335 SAMN02401339 34.6% 1,970,999 124 1,843 ☆☆☆☆ Contig 98.95% 0.76%
GCA_000309565.2 Lactobacillus paracasei 12A Lactobacillus casei 12A PRJNA68455 SAMN02472008 46.4% 2,907,892 1 2,743 ☆☆☆☆☆ Complete Genome 99.35% 0.48% The organism name was amended based on the ANI result.
GCA_001311175.1 Lactobacillus pantheris JCM 12539 Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 PRJDB764 SAMD00000433 type strain 52.8% 2,530,740 81 3,068 ☆☆☆ Contig 93.09% 2.63%
GCA_001436475.1 Lactobacillus ruminis DSM 20403 Lactobacillus ruminis DSM 20403 = NBRC 102161 PRJNA222257 SAMN02369384 type strain 43.4% 2,008,484 115 1,874 ☆☆☆☆ Contig 98.71% 0.48%
GCA_000260415.1 Lactobacillus mali KCTC 3596 Lactobacillus mali KCTC 3596 = DSM 20444 PRJDA68085 36.0% 2,651,908 114 2,616 ☆☆☆☆ Contig 98.06% 1.42%
GCA_000159335.1 Lactobacillus jensenii JV-V16 Lactobacillus jensenii JV-V16 PRJNA31493 SAMN00001502 34.4% 1,604,632 1 1,432 ☆☆☆☆☆ Chromosome 98.71% 0.16%
GCA_001311525.1 Lactobacillus oryzae JCM 18671 Lactobacillus oryzae JCM 18671 PRJDB781 SAMD00000461 type strain 42.8% 1,840,174 91 2,559 ☆☆☆ Contig 93.07% 0.89%
GCA_000751895.1 Lactobacillus delbrueckii subsp. bulgaricus unkown Lactobacillus delbrueckii subsp. bulgaricus PRJEB5827 SAMEA2580781 49.7% 1,818,010 14 1,885 ☆☆☆☆ Scaffold 99.03% 0.16%
GCA_000359625.1 Lactobacillus brevis KB290 Lactobacillus brevis KB290 PRJDA64661 45.6% 2,587,877 10 2,568 ☆☆☆☆☆ Complete Genome 99.03% 0.56%
GCA_001438685.1 Lactobacillus lindneri DSM 20690 Lactobacillus lindneri DSM 20690 = JCM 11027 PRJNA222257 SAMN02797783 type strain 34.1% 1,442,612 36 1,443 ☆☆☆☆ Scaffold 98.42% 0.87%
GCA_000163095.1 Pediococcus acidilactici 7_4 Pediococcus acidilactici 7_4 PRJNA40051 SAMN02463809 42.0% 2,017,988 9 1,945 ☆☆☆☆ Scaffold 99.66% 0.93%
GCA_001435165.1 Lactobacillus saerimneri DSM 16049 Lactobacillus saerimneri DSM 16049 PRJNA222257 SAMN02369413 type strain 42.6% 1,692,961 92 1,693 ☆☆☆☆ Contig 98.71% 0.16%
GCA_000615125.1 Lactobacillus gasseri JCM 1131 Lactobacillus gasseri ATCC 33323 = JCM 1131 PRJDB635 SAMD00003499 type strain 35.0% 1,823,247 20 1,825 ☆☆☆☆ Contig 99.3% 0.16%
GCA_001011095.1 Lactobacillus salivarius Ren Lactobacillus salivarius str. Ren PRJNA247452 SAMN02584770 33.0% 1,978,364 3 1,907 ☆☆☆☆☆ Complete Genome 99.03% 0.16%
GCA_001438805.1 Lactobacillus kimchiensis DSM 24716 Lactobacillus kimchiensis PRJNA222257 SAMN02797788 type strain 35.5% 2,698,724 71 2,579 ☆☆☆☆ Contig 99.14% 2.63%
GCA_001438845.1 Lactobacillus xiangfangensis LMG 26013 Lactobacillus xiangfangensis PRJNA222257 SAMN02797795 type strain 45.1% 2,989,578 103 2,757 ☆☆☆☆ Scaffold 99.03% 1.85%
GCA_001444495.1 Lactobacillus plantarum CRL 1506 Lactobacillus plantarum PRJNA301568 SAMN04266587 44.6% 3,228,096 14 3,022 ☆☆☆☆ Contig 99.35% 1.53%